DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and Acsm2

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:534 Identity:137/534 - (25%)
Similarity:218/534 - (40%) Gaps:96/534 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TGEELTGS--QLLEQSRRLAHAFQ-RLKLQRGDVVGISAKNTTYLTEVVIAALLNGTPINPLHPD 111
            :||||..:  :|.|.|::.|:... ...|||||.|.:..........|.:..:.:|....|....
  Rat    75 SGEELKWNFRELSEISKQTANVLTGACGLQRGDRVAVVLPRVPEWWLVTLGCMRSGLVFMPGTTQ 139

  Fly   112 FDAETTAYMFEITKPKVIFCDLDNYQTLSAVKSSLKF-KTEIILLTGTLPGVRNIQDLLADGCTG 175
            ..:....|..:.:|.:.|....:..|.:.||.....| |.::::......|..|.:.||.|.   
  Rat   140 MKSTDILYRLQSSKARAIVAGDEVVQEVDAVAPDCSFLKIKLLVSEKNREGWLNFKALLKDA--- 201

  Fly   176 YDEKTLFACPHLCGDDTAFIITSSGVTGLPKGVTRSHRSLLNSAKIPQLFT----SDTVLFCFSP 236
               ..:..|......::|.|..:||.:|.||....||.||...||:...:|    ||| ::..|.
  Rat   202 ---SPIHQCVETVSQESAAIYFTSGTSGPPKMAEHSHCSLGLKAKMDAGWTGLGPSDT-MWTISD 262

  Fly   237 LYWI--------------SCIF----------TLLASLVNGCRRIITNRPFSVAYFADLVERHQV 277
            ..||              :|||          |:|        :::::.|.:....|.|:.|   
  Rat   263 TGWILNILGSFLEPWVLGTCIFVHLLPKFDPQTVL--------KVLSSYPINTLLGAPLIYR--- 316

  Fly   278 SFVLTVPHHMALLAKSPERQELAA-KMQCVQSFVCSGSKV---PMGIWRQLYELLGANRFAVLYG 338
                     |.|      :|:|:: |...:.|....|..:   .:..|:....|    ....:||
  Rat   317 ---------MLL------QQDLSSYKFPHLHSCFSGGETLLPETLESWKAKTGL----EIREIYG 362

  Fly   339 LTETG---GISKNVGGPLGSEGRLLRNVQVRVVDPHGQSLGPNQTGQILVRLN-LR----WGGYY 395
            .||||   .:|:.:....|..|..:....|:|:|..|..|.|.:.|.:.:|:. :|    :.||.
  Rat   363 QTETGITCRVSRTMKVKPGYLGTAIVPYDVQVIDEQGNVLPPGKEGDMALRVKPIRPIGMFSGYV 427

  Fly   396 HNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFPIYPKQIEDVILHLPGVHE 460
            .||::||..:..| .||| ||.|..|.||..||..|..|:...:.:.|.|.::|:.::..|.|.|
  Rat   428 DNPKKTQANIRGD-FWLL-GDRGIKDTEGYFHFMGRTDDIINSSGYRIGPSEVENALMEHPAVVE 490

  Fly   461 VAVFGIPDEVSTNLTACAVV-------RNEDELGAQLTEADVKGVVAQHLSDAFHIRGGVFFVDN 518
            .||...||.:...:....||       .::|:|...|.| .||.|.|     .:.....|.||.:
  Rat   491 TAVISSPDPIRREVVKAFVVLAPEFLSHDQDQLTKVLQE-HVKSVTA-----PYKYPRKVEFVLD 549

  Fly   519 LPKTQNSKVQRRKI 532
            ||||...|::|.|:
  Rat   550 LPKTITGKIERAKL 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 136/532 (26%)
AFD_class_I 45..528 CDD:302604 135/528 (26%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 137/534 (26%)
Acs 40..565 CDD:223442 137/534 (26%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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