DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and acs-18

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_501893.1 Gene:acs-18 / 177918 WormBaseID:WBGene00011173 Length:700 Species:Caenorhabditis elegans


Alignment Length:610 Identity:140/610 - (22%)
Similarity:237/610 - (38%) Gaps:134/610 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GPDMTLGEVALIILRLYSDKVMQVYDPTGEELTGSQLLEQSRRLAHAFQRLKLQRGD--VVGISA 85
            ||  |:|...::..|:..|..::     .|.::..|..|.|...:.|.::|.::.|:  .:||.:
 Worm    91 GP--TVGGKEMLGKRVMKDGKLE-----WEWISYDQAFETSDHASQAIRKLGIEIGEESKIGIYS 148

  Fly    86 KNTT--YLTEVVIAALLNGTPINPLHPDFDAETTAYMFEITKPKVIFCDLDNYQTLSAVK----- 143
            .|..  .|:|:.|....|.:.  ||:.....:...|:..:.:..::|.|.: .:|...::     
 Worm   149 NNRPEWILSEMAIHNFSNVSV--PLYDTITNDDMHYITNLCEISLMFVDAE-IKTKQLIRDKSYL 210

  Fly   144 SSLKFKTEIILLTGTLPGVRNIQDLLADGCTGYDE--KTLFACPHL--CGDDTAFIITSSGVTGL 204
            ||||:..:....:..:..:....|........:.|  |.....||:  ..:..|.|..:||.||.
 Worm   211 SSLKYIVQFNECSDDIKEMARENDFRLWSFNEFVEMGKKQKHRPHVPPTPETLATISFTSGTTGR 275

  Fly   205 PKGVTRSHRSLLNSAKIPQLFTSDT----VLFCFSPLYWISCIFTLLASLVNGCR---------- 255
            ||||..:|.::.::....:.|.::.    ....:.||..|.....||::.:.|.|          
 Worm   276 PKGVMLTHLNMCSATMSCEEFENEAGVQDAYLSYLPLAHIYERLCLLSNFMIGSRIGFSRGDPKL 340

  Fly   256 -----RIITNRPF-SVAYFADLVERHQVSFVLTVP--------------HHMALLAKSPERQELA 300
                 :.:..|.| :|....|.:.:..:..|...|              :|..:..|       |
 Worm   341 LVDDVQALAPRSFATVPRVIDKIHKAVMKQVQDKPLKKMILNAAIAYKLYHYKMTGK-------A 398

  Fly   301 AKMQCVQSFVCSGSKVPMGIWRQLYELL--------GANRFA-------VL--YGLTETGGIS-- 346
            .:...|..:|.  .|:.|.:...:.:|:        .|.|||       ||  ||.|||.|.:  
 Worm   399 TRKTWVDKYVL--HKIQMLLGPNIRQLILGAAKSDVSAMRFARGAFGVEVLEGYGQTETSGPTTL 461

  Fly   347 KNVGGP-LGSEGRLLRNVQVRVVD-PH-GQSLGPNQTGQILVRLNLRWGGYYHNPQETQVTVTPD 408
            :.||.. :|..|..:....::::| |. |.|:..| .|::||:.:....|||.||:.|..:.|.|
 Worm   462 QLVGDTRIGCVGPPMACAMIKLIDVPELGYSVDKN-GGEVLVKGHNVTSGYYKNPEATASSFTED 525

  Fly   409 GKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFP----IYPKQIEDVILHLPGVHEVAVFG---- 465
            | ::.|||.|.|..||.|....|..:|||   .|    :.|...|.:......|.::.|.|    
 Worm   526 G-YMKTGDIGRFTAEGSLQIIDRRKNVFK---MPQGKFVAPDLTESLYTSSSFVQQIYVHGDMEK 586

  Fly   466 -------IPDE---VSTNLT-----------ACAVVRNEDELGAQ---LTEAD----VKGVVAQH 502
                   :||.   .|..||           .|.:....|::..|   |||.|    .:||...|
 Worm   587 PWLVAIVVPDPEYLASYALTKHNINGKTYEQLCNIPILADDVLRQFVELTEEDKRPRYEGVYGVH 651

  Fly   503 LSD-AFHIRGGVFFVDNLPKTQNSK 526
            |:. ||....|:    ..|..:|.:
 Worm   652 LTPVAFSAENGL----TTPTLKNKR 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 140/610 (23%)
AFD_class_I 45..528 CDD:302604 134/588 (23%)
acs-18NP_501893.1 LC-FACS_euk 111..688 CDD:341250 134/588 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160563
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.