DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9993 and Acsl4

DIOPT Version :9

Sequence 1:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:597 Identity:126/597 - (21%)
Similarity:209/597 - (35%) Gaps:186/597 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ELTGSQLLEQSRRLAHAFQRLKLQRGDVVG----ISAKNTTYLTEVVIAALLNGT-------PIN 106
            ::.|:..|:  :...||.  .|..:.|.:|    :|.:|.......|...|:.|.       .:|
  Rat    72 DIPGADTLD--KLFDHAV--AKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWINYLEVN 132

  Fly   107 PLHPDFDAETTAYMFEITKPK---VIFCDLDNYQTLSAVKSSLKFKTEIILLTGTL--------- 159
            ....:|.:..||...   |||   .|||: ...:.:.|.::..|:...::.|..||         
  Rat   133 CRVNNFGSGLTALGL---KPKNTIAIFCE-TRAEWMIAAQTCFKYNFPLVTLYATLGKEAVVHGL 193

  Fly   160 ---------PGVRNIQD-----LLADGCTGY----DEKTLFACPHLCG----------------- 189
                     ..|..::.     ||...|..:    |.||:....:..|                 
  Rat   194 NESEASYLITSVELLESKLKAALLDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEELGSKPE 258

  Fly   190 -----------DDTAFIITSSGVTGLPKGVTRSHRSLL-----NSAKIPQLFTSDTVLFCFSPLY 238
                       .|.|.::.:||.||.||||...|.:|:     ...:||.|...||.: .:.||.
  Rat   259 NSSIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYI-GYLPLA 322

  Fly   239 WISCIFTLLASLVNGCRRIITNRPFSVAYFADLVERHQVSFV-------LTV--PHHMALLAKSP 294
            .:..:...::....|||         :.|.:.|....|.|.:       .||  |   .|:|..|
  Rat   323 HVLELTAEISCFTYGCR---------IGYSSPLTLSDQSSKIKKGSKGDCTVLKP---TLMAAVP 375

  Fly   295 ERQELAAK--MQCVQSF------------------VCSGSKVPMG---IWRQLYELLGAN----- 331
            |..:...|  |..||..                  :..|...|:.   :::::..|||.|     
  Rat   376 EIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALLGGNVRMML 440

  Fly   332 -----------RFAVL---------YGLTETGG----------ISKNVGGPLGSEGRLLRNVQVR 366
                       ||..:         |||||:.|          .:..||.||......|::.|..
  Rat   441 SGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEG 505

  Fly   367 VVDPHGQSLGPNQTGQILV---RLNLRWGGYYHNPQET--QVTVTPDG-KWLLTGDHGYFDDEGC 425
            ....|.:   ||..|:|::   .:::   ||:.|.::|  ..:|..:| :|..|||.|.|..:||
  Rat   506 GYTVHDK---PNPRGEIVIGGQNISM---GYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGC 564

  Fly   426 LHFQSRDTDVFK-----YNHFPIYPKQIEDVILHLPGVHEVAVFGIPDEVSTNLTACAVVRNEDE 485
            |....|..|:.|     |    :...::|..:.:.|.:..:..|...|:   :.....||.|:.:
  Rat   565 LQIIDRKKDLVKLQAGEY----VSLGKVEAALKNCPLIDNICAFAKSDQ---SYVISFVVPNQKK 622

  Fly   486 LGAQLTEADVKG 497
            |.....:..|:|
  Rat   623 LTLLAQQKGVEG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9993NP_611518.1 CaiC 21..532 CDD:223395 126/597 (21%)
AFD_class_I 45..528 CDD:302604 126/597 (21%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 115/544 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342836
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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