DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and AT2G17650

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_179356.1 Gene:AT2G17650 / 816272 AraportID:AT2G17650 Length:603 Species:Arabidopsis thaliana


Alignment Length:531 Identity:133/531 - (25%)
Similarity:218/531 - (41%) Gaps:84/531 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKY 120
            |..|..|:..|:|.|...||:.|||||...|.|...:..:..|..:.|:.:.||:......|:..
plant    88 TWFQTYQRCLRLASALTNLGISRGDVVAALAPNVPAMHELHFAVPMAGLILCPLNTRLDPSTLSV 152

  Fly   121 MYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIYLVNGKLEGVLDISEMLNDED------SITAA 179
            :...:|.|::|.|   :.:::..:|.|...||.......|:.|| ||:..:|:|      |..|:
plant   153 LLAHSEAKILFVD---HQLLEIAHGALDLLAKSDKTRKSLKLVL-ISQSNDDDDSDEDSSSTFAS 213

  Fly   180 AY------------------VPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCN------CK 220
            .|                  :..|:...|..: |..:||||..||||..|||....|      ..
plant   214 KYSFDYEYETLLKSGDSEFEIIKPRCEWDPIS-INYTSGTTSRPKGVVYSHRGAYLNSLATVFLH 277

  Fly   221 NPNTYTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASH 285
            ..:.|   .|.|...|::..:|..::......|...|.. |..|.:.:.:.:|.||||.:..|..
plant   278 QMSVY---PVYLWTVPMFHCNGWCLVWGVAAQGGTNICL-RKVSPKMIFKNIAMHKVTHMGGAPT 338

  Fly   286 QIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMGGLSKNV 350
            .:.::..:  .|.|.|.....:.::.| ||.....:..:|.||        |:.:|.:.||::..
plant   339 VLNMIVNY--TVTEHKPLPHRVEIMTG-GSPPLPQILAKMEEL--------GFNVSHLYGLTETY 392

  Fly   351 GGPVGCEGKV------------------MRNVELRVLDKLKMPLGINEV---GIIYARLRFK--- 391
            |....|..|.                  ::::.|..|| :|.||.:..|   |:....:.|:   
plant   393 GPGTHCVWKPEWDSLSLEERTKLKARQGVQHLGLEGLD-VKDPLTMETVPDDGLTMGEVMFRGNT 456

  Fly   392 -WAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILR 455
             .:||:::.||||:|...|  ||.:||:.....:||:.|:.|..||.......|...::|..:..
plant   457 VMSGYFKDIEATRKAFEGD--WFHSGDLAVKYPDGYIEIKDRLKDVIISGGENISSVEVERVLCS 519

  Fly   456 LPGVSEACVFGIPDAVSTNLTACAVVRTKSPEG-ERLTADHIRNIVEHHLSGAYHIRGGVYFIDS 519
            ...|.||.|...||. ....|.|..|:.|  || :.:..:.|......||  .:::.........
plant   520 HQAVLEAAVVARPDH-HWGQTPCGFVKLK--EGFDTIKPEEIIGFCRDHL--PHYMAPKTIVFGD 579

  Fly   520 LPKTPNDKLQR 530
            :|||...|:|:
plant   580 IPKTSTGKVQK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 133/531 (25%)
AFD_class_I 38..529 CDD:302604 132/528 (25%)
AT2G17650NP_179356.1 ttLC_FACS_AEE21_like 58..595 CDD:341283 133/531 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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