DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and dip2bb

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_009300851.1 Gene:dip2bb / 568954 ZFINID:ZDB-GENE-100729-4 Length:1615 Species:Danio rerio


Alignment Length:623 Identity:124/623 - (19%)
Similarity:228/623 - (36%) Gaps:164/623 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PEMTLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQA-FKRLGLRRGDVVGISANN 88
            |:.||      .:.:||..| .:|..     |..||.:::.:||.| .:|.|:..|:.|.:....
Zfish  1043 PDHTL------YVLLNAKGV-AVCTA-----TCVQLHKRAEKIAAALMERSGINIGENVVLLYPP 1095

  Fly    89 STYLTSVIIAALLRG---IPINPLHPE---FTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKL 147
            ...|.:.....|..|   :.:.|.||:   .|..||:.:.|:::..   |.:....:.|.:..| 
Zfish  1096 GIDLIAAFYGCLYAGCIPVTVRPPHPQNLSATLPTVRMIIDVSKAA---CILTTQVLTKILRSK- 1156

  Fly   148 QNPAKIYLVNGKLEGVLDISEMLNDEDSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSH 212
            :..|.:.:....:  ::|..::....   ....|.| |  :.:..|::..|..||||..||..||
Zfish  1157 EAAATVNIKTWPI--IIDTDDLPRKR---PPTIYKP-P--NAEMIAYLDFSVSTTGMLTGVKISH 1213

  Fly   213 -------RSLLCNCKNPNTYTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSVEYLLQ 270
                   ||:...|:   .|:...:.:...|...:...:..|||:.:|.:.|:. .|..:|..|.
Zfish  1214 AAVSALCRSIKLQCE---LYSSRQIAICLDPYCGLGFVLWCLASVYSGHQSILI-PPMELETSLT 1274

  Fly   271 L----VARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKA-----VCRRMY 326
            |    ::::::...|.:...:.|.:|.                 :|..:::.||     .|.|..
Zfish  1275 LWLGTLSQYRIRDTFCSYSVMELCTKG-----------------LGGQTELLKARGVNLSCVRSC 1322

  Fly   327 ELIGNQ--RFVVGYGLSEMGGLSKNVG------------------------GP----VGCEGKVM 361
            .:|..:  |..:.:..|:   |.|::|                        ||    |..:.|.:
Zfish  1323 VVIAEERPRLALTHSFSK---LFKDIGLSMRAVSTAFGSRVNLAICLQGTTGPDPSTVYVDMKSL 1384

  Fly   362 RNVELRVLDK--------------------------LKMPLGINEVGIIYARLRFKWAGYY---- 396
            |:..:|::::                          .:.|||.:.:|.|:........|||    
Zfish  1385 RHDRVRLVERGAPQSLPLMESGTILPGVRVVIVNPETRGPLGDSHLGEIWVNSPHNATGYYTIYG 1449

  Fly   397 -RNPEA----TRRALSS-DGMWFRTGDIGYL----------DSEGYLYIQTRDTDVFKFNNFQIY 445
             .|.:|    |:.:... ..:|.|||.:|::          |....|::.....:..:....:.:
Zfish  1450 EENLQADHFNTKLSFGDPQTLWARTGYLGFVKRTELTDASGDRHDALFVVGYLDETLELRGLRYH 1514

  Fly   446 PEQIEEFILRL-PGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTADHIRNIV--EHHLSGA 507
            |..||..:.|. ..:.|:.||     ..|||.........|.:........:.|:|  ||||   
Zfish  1515 PIDIETSVSRAHRSIGESAVF-----TWTNLLVVVAELCGSEQDALDLVPLVTNVVLEEHHL--- 1571

  Fly   508 YHIRGGVYFIDS--LPKTPNDKLQRRKVLG--LVQQLE 541
              |.|.|..:|.  :|.....:.||..:..  |..||:
Zfish  1572 --IVGVVVIVDPGVIPINSRGEKQRMHLRDSFLADQLD 1607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 124/623 (20%)
AFD_class_I 38..529 CDD:302604 116/594 (20%)
dip2bbXP_009300851.1 DMAP_binding 9..137 CDD:283995
Dip2 391..955 CDD:213273
AFD_class_I 1052..1604 CDD:327384 119/603 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.