DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and acsl3a

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001038593.1 Gene:acsl3a / 567157 ZFINID:ZDB-GENE-050420-181 Length:713 Species:Danio rerio


Alignment Length:595 Identity:123/595 - (20%)
Similarity:204/595 - (34%) Gaps:183/595 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LGEVIMRVLQINADQVMQICDTTGQELTGAQLA-QQSARIAQAFKRLGLRRGDVVGISANNSTYL 92
            ||:..|:.:.|       .|:|..:.:..||.. ..:..:...:..||   |..:....|.:.  
Zfish   147 LGQKPMKNIAI-------FCETRAEWIIAAQACFMYNFPLVTLYSTLG---GPAIAHGLNEAE-- 199

  Fly    93 TSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENY-HIIKTVNGKLQNPAKIYLV 156
            .|.||                   |.|.:.: |:.|.||.:|... |:| .|:.||...:: |..
Zfish   200 VSHII-------------------TSKDLLE-TKLKSIFIEVPRLCHVI-VVDDKLSTSSE-YPR 242

  Fly   157 NGKLEGVLDISEMLNDEDSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKN 221
            ...:..:..:.|:....::.:.....||    ....|.|:.:||:||:||||..||.:::.....
Zfish   243 GISIHSMASVKELGARPENASKPKNPPC----SSDVAVIMYTSGSTGVPKGVMISHSNIISGITG 303

  Fly   222 PN----TYTRDSVLLSFSPLYWISGTIILLASLLNGCR--------------------------- 255
            ..    ....|...:.:.||..:......:..|.:|||                           
Zfish   304 MTHRIPKLVEDDTYIGYLPLAHVLELSAEMVCLAHGCRIGYSSPQTLSDQSTKIKKGSRGDISVL 368

  Fly   256 -------------RIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSI 307
                         ||..|....||   |:....:..||...::::..|:...|..:..|...:.:
Zfish   369 RPTLMAAVPEIMDRIYKNVMLRVE---QMSGFQRTLFLLAYNYKMEQLAMGYSTPLCDKLVFRKV 430

  Fly   308 RVLIG-------AGSKVCKAVCRRMYEL-----IGNQRFVVGYGLSEMGGL----------SKNV 350
            |.|:|       :|.....|..:|...:     :|.     ||||:|..|.          :..|
Zfish   431 RALLGGRLRVLLSGGAPLSAATQRFMNICFCCPVGQ-----GYGLTETCGAGTISHLWDYSTGRV 490

  Fly   351 GGPVGCEGKVMRNVELRVLDKLK-------MPLGINEVGIIYARLRFKWAGYYRNPEATRRALSS 408
            |.|:.|       .||::.|.::       :|....|:.:....:..   |||:|...|......
Zfish   491 GAPLVC-------CELQLKDWIEGGYHSTDLPCPRGEILVGGPSITM---GYYKNTHKTSEDFFV 545

  Fly   409 D---GMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDA 470
            |   ..||.|||||.:..:|.|.|..|..|:.|.        |..|::..  |..||.:...|  
Zfish   546 DKKGQRWFCTGDIGEIHGDGCLKIIDRKKDLVKL--------QAGEYVSL--GKVEAALKNCP-- 598

  Fly   471 VSTNLTACAVVRTKSPEGERLTADHIRNIVEHHLSGAYHIRGGVYFIDSLPKTPNDK-----LQR 530
            :..|:.|.|                  |..|.::.|         |:     .||.|     .:|
Zfish   599 LVDNICAYA------------------NSDESYVIG---------FV-----VPNQKQLLALAER 631

  Fly   531 RKVLGLVQQL 540
            ::|.||.::|
Zfish   632 KRVRGLWEEL 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 123/595 (21%)
AFD_class_I 38..529 CDD:302604 115/573 (20%)
acsl3aNP_001038593.1 PLN02387 77..710 CDD:215217 123/595 (21%)
LC-FACS_euk 123..710 CDD:213293 123/595 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583084
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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