DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and acsl1a

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001027007.1 Gene:acsl1a / 555308 ZFINID:ZDB-GENE-050809-115 Length:697 Species:Danio rerio


Alignment Length:545 Identity:126/545 - (23%)
Similarity:198/545 - (36%) Gaps:118/545 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FYGPEMTLGEVIMRVLQINADQVMQICDTTGQE---LTGAQLAQQSARIAQAFKRLG-LRRGD-V 81
            :|...:||.|..:|.|::..:.........||.   |:..::|.::.....|....| .:.|| .
Zfish    85 YYKDALTLYEFFLRGLRVPNNGPCLGSRKAGQPYKWLSYKEVADRAEFAGSALLHRGHSQSGDKY 149

  Fly    82 VGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGK 146
            :||.|.|....|...:|.....:...||:.....|.:.|:.|......|.||:            
Zfish   150 IGIFAQNRPEWTISELACYTYSLVAVPLYDTLGTEAISYVIDKASITTIICDI------------ 202

  Fly   147 LQNPAKIYL--VNGKLEGVLDISEMLNDEDSITAAAY---------------------VPCPKLH 188
             .:.|::.|  |:|:...|..|..|.:.:..:||.|.                     .|.|...
Zfish   203 -ADKARLILDCVSGRKHSVTTIVIMESFDSELTAQAQNCGIDIISLKELEAIGKANHKTPIPPKP 266

  Fly   189 GDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYT-------RDSVLLSFSPLY-------- 238
            .| .|.|..:|||||.|||...:|.:::.||......|       :..:.:|:.||.        
Zfish   267 ED-LALICFTSGTTGNPKGAMLTHGNVVSNCSAFIKITEVHCMLNQTDIHISYLPLAHMFERVVE 330

  Fly   239 -----------WISGTIILLASLLNGCRRII------------------TNRPYSVEYLLQLVAR 274
                       :..|.|.||...|...:..|                  .|.|.. .:||.....
Zfish   331 GVLLCHGAKIGYFQGDIRLLMDDLKNLKPTIFPVVPRLLNRMFDKIFGQANTPLK-RWLLDFATS 394

  Fly   275 HKVTFLFLASHQIALLSKHDSDVM-ELKAQLQS-IRVLIGAGSKVCKAVCRRMYELIGNQRFVVG 337
            .|..  .|.|..:...|..|..:. :::|.|.. :|::|...:.|...|...:...:|.| |..|
Zfish   395 RKEA--ELKSGVVRKDSMWDKLIFSKVQASLGGRVRLMITGAAPVSPTVLTFLRAALGCQ-FYEG 456

  Fly   338 YGLSEMGG----------LSKNVGGPVGCEGKVMRNVELRVLDKLKMP-LGINEVGIIYARLRFK 391
            ||.:|...          .:.:||.|:.|.       .::::|..:|. ...|..|.:..:....
Zfish   457 YGQTECTAGCTMSLPGDWTAGHVGAPLPCN-------FVKLVDVAEMNYFAANGEGEVCVKGPNV 514

  Fly   392 WAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQ-IYPEQIEEFILR 455
            :.||.::||.|..|:...| |..|||||.....|.|.|..|...:||....: |.||:||...:|
Zfish   515 FQGYLKDPEQTSGAVDKAG-WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIR 578

  Fly   456 LPGVSEACVFGIPDAVSTNLTACAV 480
            ...|::..|.|      .:|.||.|
Zfish   579 SDPVAQVFVHG------DSLQACLV 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 125/542 (23%)
AFD_class_I 38..529 CDD:302604 120/529 (23%)
acsl1aNP_001027007.1 PLN02736 88..695 CDD:178337 125/542 (23%)
LC-FACS_euk 116..692 CDD:213293 119/514 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583161
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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