DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and CG4830

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster


Alignment Length:540 Identity:174/540 - (32%)
Similarity:275/540 - (50%) Gaps:17/540 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YDAASRTWFGPRGKDFYGPEMTLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAF 71
            |||.::.|.|....:.:.||.:||.:|.:.::.....|.||.|:.|.|:|..|....:.||||..
  Fly     8 YDAENKIWKGIPQNNPFKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQL 72

  Fly    72 KRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVEN 136
            |..||...|::||||.|:||:....:|....|.|....:|...|.|:|::|:|::||:||.|.::
  Fly    73 KSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTDADH 137

  Fly   137 YHIIKTVNGKLQNPAKIYLVNGKLEGVLDISEMLNDEDSITAAAYVPCPKLHG-DHTAFIVCSSG 200
            |..:.:.....:  .:|.|..|..:|||.|.::|  ..:.|...|.|.|...| ..|..|:.|||
  Fly   138 YDKLYSATSAFK--PEIILTTGTKDGVLSIQDLL--APTKTEFFYQPTPLKEGPSQTVAILTSSG 198

  Fly   201 TTGMPKGVTRSHRSLLCNCKNPNTYTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSV 265
            ||||||.|..|:..|.......|.|  |::.:|.| |.||:|....:.|.:|||.|||:::|::.
  Fly   199 TTGMPKAVCISNDILTQETVFVNGY--DTIFISAS-LDWITGLWATIFSTVNGCTRIISSKPFAA 260

  Fly   266 EYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIG 330
            :|.:.||:::.:|:..:.......|....:...|   :|.|:..|...|.::.:|...|:.:|..
  Fly   261 DYFVYLVSKYSITYALIPPEHCCSLLDCPTATPE---KLGSLTKLNFGGGRMTQATVERVKKLAP 322

  Fly   331 NQRFVVGYGLSEMGGLSKNVGG-PVGCEGKVMRNVELRVLDKLKMPLGINEVGIIYARLRFKWAG 394
            |......||::|:|.:..|.|. .:...|..:..::::::|.....||:|:.|.|.....|.|.|
  Fly   323 NGVLNSSYGMTEVGFIVFNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEIIVHNGFSWNG 387

  Fly   395 YYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGV 459
            |:.:||||:.....:| ||.|||:||.|.:.|||:..|..:|.|:...|::|.::|..|..||.|
  Fly   388 YFADPEATKAMQDEEG-WFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEV 451

  Fly   460 SEACVFGIPDAVSTNLTACAVVRTKSPEGERLTADHIRNIVEHHLSGAY-HIRGGVYFIDSLPKT 523
            ...||.|:.|....::....|||   .:...|||..:.:.|...|.... .:|.||.|.|.:|:.
  Fly   452 KRVCVIGVYDETQGDVPGALVVR---EDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQN 513

  Fly   524 PNDKLQRRKVLGLVQQLELK 543
            .|.|:.||....|...|..|
  Fly   514 HNGKVVRRYARDLFVALSKK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 169/522 (32%)
AFD_class_I 38..529 CDD:302604 159/493 (32%)
CG4830NP_650160.1 CaiC 18..529 CDD:223395 167/524 (32%)
AFD_class_I 46..518 CDD:302604 157/485 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471335
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26958
OrthoDB 1 1.010 - - D24284at7147
OrthoFinder 1 1.000 - - FOG0004528
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X778
87.860

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