DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Fatp3

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster


Alignment Length:549 Identity:111/549 - (20%)
Similarity:212/549 - (38%) Gaps:107/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEET 117
            :.|:.|:..:.|.:||..|...||.|||.|.:..........:.:.....|:....::.....|:
  Fly   137 RHLSFAEALEFSQKIAGYFSDRGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGES 201

  Fly   118 VKYMYDITEPKVIFCDVENYHIIKTVNGKLQ-NPAKIYL-----VNG-----KLEGVLDISEMLN 171
            :.:...:...|.:....|...::.::..|.| :...||.     |.|     .|.|.:|:...|.
  Fly   202 LLHSIKVANAKALIVGSELLDVLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALK 266

  Fly   172 DEDSITAAAYVPCPKLHGDHTA--FIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTY-----TRDS 229
            .:..:...:.| ||   |:..:  ..|.:|||||:||....::...|  ..:..:|     :.|.
  Fly   267 TQKKLELPSAV-CP---GEARSKLLYVYTSGTTGLPKAAVITNLRFL--FMSAGSYYMLKMSSDD 325

  Fly   230 VLLSFSPLYWISGTIILLA-SLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASH-----QIA 288
            |:....|||..:|.|:.:. ::||| ..::..:.:|.........||..|   :|.:     :..
  Fly   326 VVYDPLPLYHTAGGIVGVGNAILNG-STVVLRKKFSARNFWLDCDRHNCT---VAQYIGELCRYL 386

  Fly   289 LLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMG--------- 344
            |.:.:..|     .|..::|::.|.|          :...|.:| ||..:|:..:|         
  Fly   387 LATSYSPD-----QQKHNLRLMYGNG----------LRPQIWSQ-FVRRFGIPHIGEIYGATEGN 435

  Fly   345 ----GLSKNVG--GPVGCEGKVMRNVELRVLDK-----LKMPLG------INEVGIIYARLRFKW 392
                .::..||  |.|...|..:..|::...|:     ||...|      ..:.|::..::..:.
  Fly   436 SNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARR 500

  Fly   393 A-----GY----YRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQ 448
            |     ||    ....:..|...:|..::|.:||:...|..||.|.:.|..|.|::....:..::
  Fly   501 AVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQE 565

  Fly   449 IEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTADHIRNIVEHHLSGAYHIRGG 513
            :|..|....|:.:..|:|:           .:...:...|.....|..|.:...:||..  :||.
  Fly   566 VEAIITNCVGLEDCVVYGV-----------QIPHVEGKAGMAAIVDPERKVDMDYLSVV--LRGS 617

  Fly   514 ---------VYFIDSLPKTPNDKLQRRKV 533
                     :..:|.:|:|...||::|::
  Fly   618 LPPYARPLFIRLLDEIPRTATFKLKKREL 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 111/549 (20%)
AFD_class_I 38..529 CDD:302604 109/543 (20%)
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 111/549 (20%)
hsFATP4_like 136..653 CDD:213305 111/549 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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