DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and acsl4b

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001093209.1 Gene:acsl4b / 334561 ZFINID:ZDB-GENE-030131-6493 Length:671 Species:Danio rerio


Alignment Length:596 Identity:123/596 - (20%)
Similarity:212/596 - (35%) Gaps:201/596 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PRGKDFYGPEMTLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDV 81
            |.||.|  .::.||....    ::.:.|.|..::.|..|..                ||.:....
Zfish    70 PNGKIF--KKLVLGNYSW----MSYEAVDQAVESFGSGLAA----------------LGQKPRQT 112

  Fly    82 VGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKY-------MYDITEPKVIFCDVENYHI 139
            :.|.............|...|..|:..|:....|:.|.|       .:.||..:::...::|  :
Zfish   113 IAIFCETRAEWMIAAQACFRRNYPLVTLYATLGEDAVAYGLNQCGATHLITSTELLQSKLKN--V 175

  Fly   140 IKTVNGKLQNPAKIYLVNGK-----------LEGVLDISEMLNDEDSITAAAYVPCPKLHGDHTA 193
            :..|:| ||:  .||:.:|:           :..:.:::|:....::::    |...:......|
Zfish   176 LFAVSG-LQH--VIYVGSGEVHQADYPQSLIIHSMQEVTELGAKPENLS----VEYERPSASDLA 233

  Fly   194 FIVCSSGTTGMPKGVTRSHRSLLC----NCKN-PNTYTRDSVLLSFSPLYWISGTIILLASLLNG 253
            .::.:||:||.||||...|.:|:.    .|:. |...::|:: :|:.||..:......::.|.:|
Zfish   234 VVMYTSGSTGNPKGVKMQHSNLIAGMAGQCQRIPGLGSQDTI-VSYLPLAHVLELTAEISCLSHG 297

  Fly   254 CRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVME-----------------LK 301
            ||             |...:.|.:|.   .|.:|...||.|..|::                 :.
Zfish   298 CR-------------LGYSSPHTLTD---QSSKIKKGSKGDCSVLKPTLIAAVPEIMDRICKNVN 346

  Fly   302 AQLQSIRVL-----------------IGAGSKVCKAV-----------C-RRMYELIG------- 330
            .:||.:.|:                 .||.|.:|..:           | |||  |.|       
Zfish   347 GKLQEMSVIKRTLFKLGFDYKLQQVSKGADSPMCDMLFFKQVNVLLGGCVRRM--LSGGAPLSAS 409

  Fly   331 NQRFV--------VGYGLSEMGGL----------SKNVGGPVGCEGKVMRNVELRVLD------- 370
            .|||:        |||||:|..|.          :..||.|:.|.       |:::.|       
Zfish   410 TQRFMNVCFCPIAVGYGLTETCGAGTISDSSDYSTGRVGAPLICS-------EIKLRDWPEGGYT 467

  Fly   371 -------KLKMPLGINEVGIIYARLRFKWAGYYRN-----------PEATRRALSSDGMWFRTGD 417
                   :.::.:|...|.:          |||.:           .||.:|       ||.|||
Zfish   468 SQDKPHPRGEILIGGPNVAM----------GYYGSEGEGQNDNFWVDEAGQR-------WFSTGD 515

  Fly   418 IGYLDSEGYLYIQTRDTDVFKFNNFQ-IYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVV 481
            ||.:..:|.|.|..|..|:.|....: :...::|..:...|.:...||:...|   .|.....||
Zfish   516 IGEVHPDGCLEIVDRKKDLVKLQAGEYVSLGKVEAAMKNSPLIDNICVYASSD---QNYVISFVV 577

  Fly   482 RTKSPEGERLT 492
                |..:.||
Zfish   578 ----PNQKNLT 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 119/588 (20%)
AFD_class_I 38..529 CDD:302604 117/575 (20%)
acsl4bNP_001093209.1 PLN02387 26..668 CDD:215217 123/596 (21%)
LC-FACS_euk 81..668 CDD:213293 118/583 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582938
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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