DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and Slc27a4

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001094176.1 Gene:Slc27a4 / 311839 RGDID:1307383 Length:643 Species:Rattus norvegicus


Alignment Length:520 Identity:97/520 - (18%)
Similarity:179/520 - (34%) Gaps:151/520 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAAL 100
            |::.:.|:...|.:.|....|..||...|:.:|...:..||..|:||.:...|......:.:...
  Rat    83 VVRRHPDKTALIFEGTNTHWTFRQLDDYSSSVANFLQARGLVSGNVVALFMENRNEFVGLWLGMA 147

  Fly   101 LRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIYLVNGKLE---- 161
            ..|:....::.....:.:::..|.::.:.:....|....:..:...| :|......:|..|    
  Rat   148 KLGVEAALINTNLRRDALRHCLDTSKARALIFGSEMASAVYEIQAIL-DPTLTLFCSGSWEPSTV 211

  Fly   162 --GVLDISEMLNDEDSITAAAYVP-CPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPN 223
              ....:..:|.|     |..::| .|........|.:.:|||||:||.....|          :
  Rat   212 PANTEHLDPLLED-----APKHLPSIPDKGFTDKLFYIYTSGTTGLPKAAIVVH----------S 261

  Fly   224 TYTR-------------DSVLLSFSPLYWISGTIILLAS-LLNG--------------------- 253
            .|.|             |.::....|||..:|.|:.:.. :|:|                     
  Rat   262 RYYRMAALVYYGFRMRPDDIVYDCLPLYHSAGNIVGIGQCVLHGMTVVIRKKFSASRFWDDCIKY 326

  Fly   254 -----------CRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSI 307
                       ||.::...|...|      :||||                              
  Rat   327 NCTIVQYIGELCRYLLNQPPREAE------SRHKV------------------------------ 355

  Fly   308 RVLIGAGSKVCKAVCRRMYELIGNQRFVVG-----YGLSE----MGGLSKNVGGPVGCEGKVMRN 363
            |:.:|.|       .|:......:.||.:.     ||.:|    :|.....||. .|...:::..
  Rat   356 RMALGNG-------LRQSIWTDFSSRFHIPQVAEFYGATECNCSLGNFDSQVGA-CGFNSRILSF 412

  Fly   364 VE----LRV----LDKLKMPLGI------NEVGIIYARL-------RFKWAGYYRNPEATRRALS 407
            |.    :||    ::.::.|.|:      .:.|.:..|:       ||..   |.|..|..:.::
  Rat   413 VYPIRLVRVNEDTMELIRGPDGVCIPCQPGQPGQLVGRIIQQDPLRRFDG---YLNQGANNKKIA 474

  Fly   408 SD-----GMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGI 467
            ||     ...:.|||:..:|..||||.:.|..|.|::....:...::|..:.||..:::..|:|:
  Rat   475 SDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLQMADVAVYGV 539

  Fly   468  467
              Rat   540  539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 97/520 (19%)
AFD_class_I 38..529 CDD:302604 96/518 (19%)
Slc27a4NP_001094176.1 PRK08279 75..643 CDD:236217 97/520 (19%)
hsFATP4_like 99..608 CDD:213305 93/504 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343032
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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