DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and Dip2c

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:639 Identity:141/639 - (22%)
Similarity:230/639 - (35%) Gaps:178/639 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LGEVIMRVLQINADQVMQI---C-DTTGQELTGAQLAQQSARIAQAFKRLG-LRRGDVVGISANN 88
            |.||:....|...|.::..   | .|....||..||.:::.:||......| |:.||.|.:....
  Rat  1032 LSEVLQWRAQTTPDHLLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPP 1096

  Fly    89 STYLTSVIIAALLRG---IPINPLHPE---FTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKL 147
            ...|.:.....|..|   |.:.|.||:   .|..|||.:.:::...   |.:....|.|.:..: 
  Rat  1097 GIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSA---CLMTTQLICKLLRSR- 1157

  Fly   148 QNPAKIYLVNGKLEGVLDIS--EMLNDEDSI----TAAAYVPCPKLHGDHTAFIVCSSGTTGMPK 206
                       :....:|:.  .::.|.|.:    .|..|.|.   :.|..|::..|..||||..
  Rat  1158 -----------EAAAAVDVRTWPLILDTDDLPKKRPAQIYKPS---NPDTLAYLDFSVSTTGMLA 1208

  Fly   207 GVTRSH-------RSLLCNCKNPNTYTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYS 264
            ||..||       ||:...|:   .|....|.:...|...:...:..|.|:.:|.:.|:. .|..
  Rat  1209 GVKMSHAATSAFCRSIKLQCE---LYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILI-PPSE 1269

  Fly   265 VE-----YLLQLVARHKVTFLFLASHQIALLSKH-DSDVMELKAQ---LQSIRVLI--------- 311
            :|     :|| .|:::||...|.:...:.|.:|. .|....|||:   |..:|..:         
  Rat  1270 LETNPALWLL-AVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRI 1333

  Fly   312 ----------------------GAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMGGLSKNVGGP- 353
                                  ..|.:|..|:|.:.:.|         :.|:|.|     ..|| 
  Rat  1334 ALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQPHRL---------WTLAEQG-----TSGPD 1384

  Fly   354 ---VGCEGKVMRNVELRVLDK--------------------------LKMPLGINEVGIIYARLR 389
               |..:.:.:|:..:|::::                          .|.|||.:.:|.|:....
  Rat  1385 PTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSA 1449

  Fly   390 FKWAGYYR--NPEATRRALSSD------------GMWFRTGDIGYL------DSEG----YLYIQ 430
            ...:||:.  ..|    :|.||            .:|.|||.:|:|      |:.|    .||:.
  Rat  1450 HNASGYFTIYGDE----SLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVV 1510

  Fly   431 TRDTDVFKFNNFQIYPEQIEEFILRL-PGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERL-TA 493
            ....:..:....:.:|..||..::|. ..|:|..||     ..|||.. .||.....|.|.| ..
  Rat  1511 GALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVF-----TWTNLLV-VVVELDGSEQEALDLV 1569

  Fly   494 DHIRNIV--EHHLSGAYHIRGGVYFID--SLPKTPNDKLQRRKVLG--LVQQLE 541
            ..:.|:|  ||:|     |.|.|..:|  .:|.....:.||..:..  |..||:
  Rat  1570 PLVTNVVLEEHYL-----IVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLD 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 141/639 (22%)
AFD_class_I 38..529 CDD:302604 133/614 (22%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 136/623 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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