DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Slc27a6

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001099615.1 Gene:Slc27a6 / 291582 RGDID:1311977 Length:619 Species:Rattus norvegicus


Alignment Length:548 Identity:120/548 - (21%)
Similarity:207/548 - (37%) Gaps:100/548 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GQELTGAQLAQQSARIAQA-FKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTE 115
            |...|...:.::|.|:|.| .....|:|||||.:..:|......|.......|..:..|:.....
  Rat    77 GDVYTYEDVDKRSNRVAHALLNHSDLKRGDVVALLMSNEPDFVHVWFGLAKLGCVVAFLNSNLRF 141

  Fly   116 ETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIYLVNGKL-EGVLDISEMLNDEDSITAA 179
            |::.:....:|||.:....:....::.:...|....:::.:...: ||::.:.|.|      :.|
  Rat   142 ESLLHCIRTSEPKAMVVGEDLLGSLEEILPSLPKHIRVWGMKDSVPEGIVSLKEKL------SLA 200

  Fly   180 AYVPCPKLHGDH-------TAFIVCSSGTTGMPKGVTRSHRSLL--------CNCKNPNTYTRDS 229
            :..|.|..|  |       |...:.:|||||:||....|...:|        ..|      |.|.
  Rat   201 SDEPVPPSH--HVTSSLKSTCLYIFTSGTTGLPKAAVISQFQVLKGSFGLWAFGC------TADD 257

  Fly   230 VLLSFSPLYWISGTIILLASLLNGCRRI----ITNRPYSVEYLLQLVARHKVTFLFLASHQIALL 290
            ::....|||..||.::    .:.||..:    :..:.:|.........::.||...........|
  Rat   258 IVYITLPLYHSSGALL----GIGGCVELGATCVLKKKFSASQFWNDCRKYNVTVFQYIGELCRYL 318

  Fly   291 SKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMGGLSKNVGGPVG 355
            .|......|     :..||.:..|:.:...|.|:..:..||.:....||.:|......|..|.:|
  Rat   319 CKQPQREGE-----KDHRVRLAVGNGMSSDVWRQFLDRFGNIKMCEFYGATEGNICFMNHTGKIG 378

  Fly   356 CEGKV------MRNVELRVLDKLK-MPL----------GINEVGIIYARLRFK--WAGYYRNPEA 401
            ..|:|      :.:.||...|..| .||          ...|.|::.:|:..|  :.||..:.:.
  Rat   379 SVGRVNFFYNLLFSFELIKYDFQKDEPLRNEQGWCYCVRKGEPGLLVSRVNKKNPFFGYTGSYKQ 443

  Fly   402 TRRALSSD-----GMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSE 461
            |:..|..|     .::|.|||:.:.|.|.:||...|..|.|::....:...::...:.||..:.|
  Rat   444 TKSKLLFDVFKKGDVYFNTGDLMFQDHENFLYFWDRIGDTFRWKGENVATTEVANVLGRLDFIQE 508

  Fly   462 ACVFGIP---------------------------DAVSTNLTACAVVRTKSPEGERLTADHIR-- 497
            |.|:|:|                           |.|.|:|.|.|..|....:.:..|....:  
  Rat   509 ANVYGVPVPGYEGKAGMTSIILKPNKSLDLEKMYDQVVTSLPAYACPRFLRIQDKMETTGTFKLK 573

  Fly   498 --NIVEHHLSGAYHIRGGVYFIDSLPKT 523
              .:||...: ...|...:||:|:|.|:
  Rat   574 KLQLVEEGFN-PLKIADPLYFMDNLKKS 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 120/548 (22%)
AFD_class_I 38..529 CDD:302604 120/548 (22%)
Slc27a6NP_001099615.1 PRK08279 58..612 CDD:236217 120/548 (22%)
AFD_class_I 77..609 CDD:302604 120/548 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343020
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.