DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and Fatp1

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster


Alignment Length:645 Identity:130/645 - (20%)
Similarity:229/645 - (35%) Gaps:216/645 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYL 92
            |:.:|..|.:|.:.|:|..:.:|  |..|..|:.:.:.::|...:..|.::||||.:...|....
  Fly   177 TVADVFERNVQAHPDKVAVVSET--QRWTFRQVNEHANKVANVLQAQGYKKGDVVALLLENRAEY 239

  Fly    93 TSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIY--- 154
            .:..:.....|: |.||                                 :|..|:.|:.::   
  Fly   240 VATWLGLSKIGV-ITPL---------------------------------INTNLRGPSLLHSIT 270

  Fly   155 ------LVNGK--LEGVLDISEML---------NDEDS-----------------ITAAAYVPCP 185
                  |:.|:  ||.|.|:::.|         |:|::                 :|.|:|....
  Fly   271 VAHCSALIYGEDFLEAVTDVAKDLPANLTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEKPN 335

  Fly   186 KL---HGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYT----RDSVLLSFSPLYWISGT 243
            |.   |.|...:|. :|||||:||....||...|......: ||    .:.:..:..|||..:|.
  Fly   336 KTQVNHHDKLVYIY-TSGTTGLPKAAVISHSRYLFIAAGIH-YTMGFQEEDIFYTPLPLYHTAGG 398

  Fly   244 IILLA-SLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSI 307
            |:.:. |:|.|....|..:                   |.||:..|..:|:::          :|
  Fly   399 IMCMGQSVLFGSTVSIRKK-------------------FSASNYFADCAKYNA----------TI 434

  Fly   308 RVLIGAGSKVCKAVCRRMYE-------LIGN-----------QRFVVG-----YGLSEMGGLSKN 349
            ...||..::...|.....|:       :.||           |||.:.     ||.:|......|
  Fly   435 GQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAKVGEFYGATEGNANIMN 499

  Fly   350 VGGPVGCEGKVMRNVELRVLDKLKMPLGI-----------------------NEVGIIYARL--- 388
            ....||..|.|.     |:|.|: .|:.|                       ||.|:...::   
  Fly   500 HDNTVGAIGFVS-----RILPKI-YPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKG 558

  Fly   389 --RFKWAGYYRNPEATRRALSSD-----GMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYP 446
              ..::.||. :.:|:.:.:..|     .|.|.:||:...|.:||||.:.|..|.|::....:..
  Fly   559 NPSREFLGYV-DEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVST 622

  Fly   447 EQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTAD----------------- 494
            .::|..:..:.|..:..|:|:....:......|.:  ..||.| |..|                 
  Fly   623 SEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAI--YDPERE-LDLDVFAASLAKVLPAYARPQ 684

  Fly   495 HIRNIVEHHLSGAYHIR---------------GGVYFIDSLPK----TPN--DKLQRRKV 533
            .||.:.:..|:|.:.:|               ..:|:..|..:    ||.  |::||.::
  Fly   685 IIRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGRYELLTPQVYDQVQRNEI 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 130/645 (20%)
AFD_class_I 38..529 CDD:302604 125/629 (20%)
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 130/645 (20%)
hsFATP4_like 199..712 CDD:213305 117/589 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452169
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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