DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsl1

DIOPT Version :10

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:551 Identity:128/551 - (23%)
Similarity:202/551 - (36%) Gaps:134/551 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FYGPEMTLGEVIMRVLQINAD-------------------QVMQICDTTGQELTGAQLAQQSARI 67
            :|....|:.:...|.:|::.|                   ||.::.:..|           ||.|
  Rat    86 YYDDVRTMYDGFQRGIQVSNDGPCLGSRKPNQPYEWISYKQVAEMAECIG-----------SALI 139

  Fly    68 AQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFC 132
            .:.||...   ...:||.:.|.....::........:.:.||:.....:.:.|:.:..|..|||.
  Rat   140 QKGFKPCS---EQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFA 201

  Fly   133 DVENYH--IIKTVNGKLQNPAKIYLV----------NGKLEGVLDIS-EMLNDEDSITAAAYVPC 184
            |.....  :::.|..||....||.::          .|:..||..|. :.|.|...:....    
  Rat   202 DKPEKAKLLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTK---- 262

  Fly   185 PKLHGDHTAFIVC-SSGTTGMPKGVTRSHRSLLCNCKNPNTYTR-------DSVLLSFSPLYWIS 241
            ||........|:| :|||||.|||...:|::::.:|......|.       :.||:||.||..:.
  Rat   263 PKPPEPEDLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPLAHMF 327

  Fly   242 GTIILLASLLNGCR-----------------------------------RIITNRPYSVE-YLLQ 270
            .|::....|.:|.:                                   ||......||: :||.
  Rat   328 ETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQANTSVKRWLLD 392

  Fly   271 LVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQS-----IRVLIGAGSKVCKAVCRRMYELIG 330
            ..::.|..  .|.|..:...|..|..:..   ::||     :|::|...:.|...|...:...:|
  Rat   393 FASKRKEA--ELRSGIVRNNSLWDKLIFH---KIQSSLGGKVRLMITGAAPVSATVLTFLRAALG 452

  Fly   331 NQRFVVGYGLSEMGG----------LSKNVGGPVGCEGKVMRNVELRVLDKLKMPLGINEVGIIY 385
            .| |..|||.:|...          .:.:||.|:.|....:.:||.......|   |..||.:..
  Rat   453 CQ-FYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAK---GEGEVCVKG 513

  Fly   386 ARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQ-IYPEQI 449
            |.: ||  ||.::|..|..||..|| |..|||||.....|.|.|..|...:||....: |.||:|
  Rat   514 ANV-FK--GYLKDPARTAEALDKDG-WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKI 574

  Fly   450 EEFILRLPGVSEACVFG-----------IPD 469
            |...||...|::..|.|           :||
  Rat   575 ENIYLRSEAVAQVFVHGESLQAFLIAIVVPD 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 Firefly_Luc_like 45..529 CDD:341237 121/509 (24%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 123/520 (24%)

Return to query results.
Submit another query.