DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsm2

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:568 Identity:126/568 - (22%)
Similarity:212/568 - (37%) Gaps:118/568 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GKDFYGPEMTLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDVVG 83
            ||...||.:.........|:.|..::.:|...|...||||               .||:|||.|.
  Rat    61 GKRSPGPALWWMNGSGEELKWNFRELSEISKQTANVLTGA---------------CGLQRGDRVA 110

  Fly    84 ISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQ 148
            :..........|.:..:..|:...|...:.....:.|....::.:.|   |....:::.|:....
  Rat   111 VVLPRVPEWWLVTLGCMRSGLVFMPGTTQMKSTDILYRLQSSKARAI---VAGDEVVQEVDAVAP 172

  Fly   149 N----PAKIYLVNGKLEGVLDISEMLNDEDSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVT 209
            :    ..|:.:.....||.|:...:|.|     |:....|.:.....:|.|..:|||:|.||...
  Rat   173 DCSFLKIKLLVSEKNREGWLNFKALLKD-----ASPIHQCVETVSQESAAIYFTSGTSGPPKMAE 232

  Fly   210 RSHRSLLCNCKNPNTYT-----------RD-----SVLLSF-SPLYWISGTIILLASLLNGCRRI 257
            .||.||....|....:|           .|     ::|.|| .|  |:.||.|.:..|       
  Rat   233 HSHCSLGLKAKMDAGWTGLGPSDTMWTISDTGWILNILGSFLEP--WVLGTCIFVHLL------- 288

  Fly   258 ITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVME--------------LKAQLQSIR 308
               ..:..:.:|::::.:.:..|..|.....:|.:.|....:              |...|:|.:
  Rat   289 ---PKFDPQTVLKVLSSYPINTLLGAPLIYRMLLQQDLSSYKFPHLHSCFSGGETLLPETLESWK 350

  Fly   309 VLIGA------GSKVCKAVCR--RMYEL----IGNQRFVVGYG---LSEMGGLSKNVGGPVGCEG 358
            ...|.      |.......||  |..::    :|..  :|.|.   :.|.|.:.     |.|.||
  Rat   351 AKTGLEIREIYGQTETGITCRVSRTMKVKPGYLGTA--IVPYDVQVIDEQGNVL-----PPGKEG 408

  Fly   359 KVMRNVELRVLDKLKMPLGINEVGIIYARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDS 423
                ::.|||  |...|:|:             ::||..||:.|:..:..| .|. .||.|..|:
  Rat   409 ----DMALRV--KPIRPIGM-------------FSGYVDNPKKTQANIRGD-FWL-LGDRGIKDT 452

  Fly   424 EGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEG 488
            |||.:...|..|:...:.::|.|.::|..::..|.|.|..|...||.:...:....||  .:||.
  Rat   453 EGYFHFMGRTDDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRREVVKAFVV--LAPEF 515

  Fly   489 ERLTADHIRNIVEHH---LSGAYHIRGGVYFIDSLPKTPNDKLQRRKV 533
            .....|.:..:::.|   ::..|.....|.|:..||||...|::|.|:
  Rat   516 LSHDQDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTITGKIERAKL 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 123/562 (22%)
AFD_class_I 38..529 CDD:302604 119/543 (22%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 126/568 (22%)
Acs 40..565 CDD:223442 126/568 (22%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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