DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and Acsm4

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_848501.1 Gene:Acsm4 / 233801 MGIID:2681844 Length:580 Species:Mus musculus


Alignment Length:513 Identity:120/513 - (23%)
Similarity:207/513 - (40%) Gaps:70/513 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEET 117
            |||  ..|::::|.:..  |..||:|||.|.:..........:.:|.:..|:...|...:.|.:.
Mouse    92 QEL--GSLSRKAANVLT--KPCGLQRGDRVAVILPRIPEWWLINVACMRTGLVFMPGTIQLTRKD 152

  Fly   118 VKYMYDITEPKVIFCDVENYHIIKTVNGKLQN-PAKIYLVNGKLEGVLDISEMLNDEDSITAAAY 181
            :.|....::.|.|....|....:.::..:..: ..|:.:.....:|.|:..|:|.     :|:..
Mouse   153 ILYRLQASKAKCIVASEEVAPAVDSIVSECPSLKTKLLVSPHHWDGWLNFQELLQ-----SASEE 212

  Fly   182 VPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSL-----LCNCKNPNTY----TRDSVLLSFSPL 237
            ..|.:........|..:|||||.||....|..||     ||     ..|    |...::.:.|..
Mouse   213 HNCVETGSQEPMAIYFTSGTTGSPKMAQHSQGSLGIGYTLC-----GRYWLDLTSSDIMWNMSDT 272

  Fly   238 YWISGTI--ILLASLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMEL 300
            .||...|  :....|...|..:.....:..:..|..:..:.:|.|..|.....:|.:.|     |
Mouse   273 GWIKAAIGSVFSTWLRGACVFVHRMAQFDTDIFLDTLTTYPITTLCSAPTVYRMLVQKD-----L 332

  Fly   301 KA-QLQSIRVLIGAGSKVCKAVCRR--------MYELIGNQRFVVGYGLSEMGGLSKNVGGPV-- 354
            |. |.:.:|..:..|..:...|..:        :||         |||.:|:|.:..|..|..  
Mouse   333 KRYQFKRLRHCLTGGEPLNPEVLEQWKMQTGLELYE---------GYGQTEVGIICANRKGEAIK 388

  Fly   355 -GCEGKVMRNVELRVLDKLKMPLGINEVGIIYARLRFK-----WAGYYRNPEATRRALSSDGMWF 413
             |..||.:...:::::|:....|...:.|.|..||:..     ::.|..|||.|...:..:  ::
Mouse   389 PGSMGKGVVPYDVQIIDENGNILPSGKEGEIALRLKSDRPFCFFSEYVDNPEKTDATIRRN--FY 451

  Fly   414 RTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTAC 478
            .|||.|.:|.:||.:...|..||...:.::|.|.::|..::..|.|.|:.|...||.:...:...
Mouse   452 VTGDRGVMDDDGYFWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKA 516

  Fly   479 AVVRT---KSPEGERLTA---DHIRNIVEHHLSGAYHIRGGVYFIDSLPKTPNDKLQR 530
            .:|..   |....|:|||   ||::|     .:..|.....|.|:..||||...|::|
Mouse   517 FIVLAAPYKCSNREKLTAELQDHVKN-----STAPYKYPRKVEFVQELPKTITGKIKR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 120/513 (23%)
AFD_class_I 38..529 CDD:302604 119/510 (23%)
Acsm4NP_848501.1 MACS_euk 48..577 CDD:213294 120/513 (23%)
Acs 49..576 CDD:223442 120/513 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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