DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsm3

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:488 Identity:111/488 - (22%)
Similarity:193/488 - (39%) Gaps:62/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DTTGQELTGA--QLAQQSARIAQAF-KRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLH 110
            |..|:||..:  :|...|.:.|... :...|:|||.|.:............:|.|..|..:.|..
Mouse    81 DGNGEELRWSFEELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPGT 145

  Fly   111 PEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQN-PAKIYLVNGKLEGVLDISEMLN-DE 173
            .:.|::.:.|....::.|.|..|......:..|..|.:| .:|:.:.....||..::.||:. ..
Mouse   146 TQLTQKDILYRLQSSKAKCIITDDTLAPAVDAVAAKCENLHSKLIVSQHSREGWGNLKEMMKYAS 210

  Fly   174 DSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRS--------------LLCNCKNPNT 224
            ||.|      |.....|....|..:|||||.||.:..:|.|              |:.:....||
Mouse   211 DSHT------CVDTKHDEMMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMWNT 269

  Fly   225 ----YTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASH 285
                :.:.:....|||  |..|..:....|..          :....:||.:::..:|....|..
Mouse   270 SDTGWAKSAWSSVFSP--WTQGACVFAHYLPR----------FESTSILQTLSKFPITVFCSAPT 322

  Fly   286 QIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMGGLSKNV 350
            ...:|.::|   |....:..|::..:.||..:...|..:..:..|...: .|||.:|...:..|.
Mouse   323 AYRMLVQND---MSRSYKFNSLKHCVSAGEPINPEVMEQWRKKTGLDIY-EGYGQTETVLICGNF 383

  Fly   351 GG---PVGCEGKVMRNVELRVLDKLKMPLGINEVG-----IIYARLRFKWAGYYRNPEATRRALS 407
            .|   ..|..||.....::::||:....|...:.|     ::..|....:..|..||..|...|.
Mouse   384 KGMKIKPGSMGKPSPAFDVKILDENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTASTLR 448

  Fly   408 SDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVS 472
              |.::.|||.||:|.:||.:...|..|:...:.::|.|.::|..::..|.::|:.|...||.:.
Mouse   449 --GSFYITGDRGYMDEDGYFWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIR 511

  Fly   473 TNLTACAVVRT---KSPEGERLTADHIRNIVEH 502
            ..:....:|..   ||.:.|:|.    :.|.||
Mouse   512 GEVVKAFIVLNPDYKSHDQEQLK----KEIQEH 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 111/488 (23%)
AFD_class_I 38..529 CDD:302604 111/488 (23%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 111/488 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.