DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsbg1

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_599216.1 Gene:Acsbg1 / 171410 RGDID:708557 Length:721 Species:Rattus norvegicus


Alignment Length:528 Identity:121/528 - (22%)
Similarity:205/528 - (38%) Gaps:133/528 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVI 130
            ::|:.|.:|||.|...|.|...||.......:..:..|..:..::...:.|..:|:.......||
  Rat   141 KVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSSPEACQYIAHDCRANVI 205

  Fly   131 FCDVENY------------HIIKTVNGKLQNPAKIYLVNGKLEGVLDISEMLN-----DEDSITA 178
            ..|.:..            | :|.|....:.|.|      |:..|..:.|::.     .|:::.|
  Rat   206 VVDTQKQLEKILKIWKDLPH-LKAVVIYQEPPPK------KMANVYTMEELIELGQEVPEEALDA 263

  Fly   179 AAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYT---------------RD 228
            ......|    :....:|.:|||||.||||..|..::        |:|               :.
  Rat   264 IIDTQQP----NQCCVLVYTSGTTGNPKGVMLSQDNI--------TWTARYGSQAGDIQPAEVQQ 316

  Fly   229 SVLLSFSPLYWISGTI-------------------ILLASLLNGCRRIITNRPYS---------- 264
            .|::|:.||..|:..|                   .|..:|:|..|.:   .|.|          
  Rat   317 EVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALKGTLVNTLREV---EPTSHMGVPRVWEK 378

  Fly   265 -VEYLLQLVA-----RHKVTFLFLASHQIAL---LSKHDSDVMELKAQLQSIRVLIGAGSKVCKA 320
             :|.:.::.|     |.|   :.|.:..:.|   |:...:|:....::|....||......:..|
  Rat   379 IMERIQEVAAQSGFIRRK---MLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLARVRQALGFA 440

  Fly   321 VCRRMYE------------LIG-NQRFVVGYGLSEMGG---LSKNVGGPVGCEGKVMRNVELRVL 369
            .|::.:.            .:| |.|...||||||..|   :|......:...|:|:....::::
  Rat   441 KCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPGCRVKLV 505

  Fly   370 DKLKMPLGINEVGIIYARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDT 434
            :  :...||.|: .::.|..|  .||....:.|..|:.|:| |..|||:|.||.:|:|||..|..
  Rat   506 N--QDADGIGEI-CLWGRTIF--MGYLNMEDKTHEAIDSEG-WLHTGDMGRLDDDGFLYITGRLK 564

  Fly   435 D-VFKFNNFQIYPEQIEEFI-LRLPGVSEACVFGIPDA---VSTNLT-ACAVVRTKSPEGERLTA 493
            : :.......:.|..|||.: :.||.:|.|.:.|  |.   :|..|| .|    |.:||    |:
  Rat   565 ELIITAGGENVPPVPIEEAVKMELPIISSAMLIG--DQRKFLSMLLTLKC----TLNPE----TS 619

  Fly   494 DHIRNIVE 501
            :...|:.|
  Rat   620 EPTDNLTE 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 121/528 (23%)
AFD_class_I 38..529 CDD:302604 121/528 (23%)
Acsbg1NP_599216.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
ACSBG_like 122..716 CDD:341256 121/528 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342869
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.