DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsl6

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006246283.2 Gene:Acsl6 / 117243 RGDID:69403 Length:722 Species:Rattus norvegicus


Alignment Length:553 Identity:124/553 - (22%)
Similarity:203/553 - (36%) Gaps:129/553 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FYGPEMTLGEVIMRVLQINAD-------------QVMQICDTTGQ-ELTGAQLAQQSARIAQAFK 72
            :|....|:.:|..|.|.|:.:             |.:...:...: |..|:.|.|...::...  
  Rat   110 YYDDARTMYQVFRRGLSISGNGPCLGFRKPEQPYQWLSYQEVAKRAEFLGSGLLQHDCKVGTE-- 172

  Fly    73 RLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENY 137
                   ..:|:.|.|........:|.....:.:.||:......:::|:.:..:...:..|..:.
  Rat   173 -------QFIGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSIRYIINTADICTVIVDKPHK 230

  Fly   138 HIIKTVNGKLQNPAKIYLV------------NGKLEGVLDISEMLNDEDSITAAAYVPCPKLHGD 190
            .|:...:.:.:....:.||            .||..|| ||..|...|||......||.|....|
  Rat   231 AILLLEHVERKETPGLKLVILMEPFDDALRERGKKCGV-DIKSMQAIEDSGQENHRVPVPPRPDD 294

  Fly   191 HTAFIVC-SSGTTGMPKGVTRSHRSLLCNCKNPNTYT-------RDSVLLSFSPLY--------- 238
            .:  ||| :|||||.|||...:|.:::.:.......|       :|.||:||.||.         
  Rat   295 LS--IVCFTSGTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFPRQDDVLISFLPLAHMFERVIQS 357

  Fly   239 ----------WISGTIILLASLLNGCRRII-------TNRPYS----------VEYLLQLVARHK 276
                      :..|.|.||:..:...|..|       .||.|.          ..:||:..|:.|
  Rat   358 VVYCHGGRVGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFHQADTSLKRWLLEFAAKRK 422

  Fly   277 ---VTFLFLASHQI----------ALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYEL 328
               |....:.::.|          |.|..|             :|:::...:.....|...:...
  Rat   423 QAEVRSGIIRNNSIWDELFFNKIQASLGGH-------------VRMIVTGAAPASPTVLGFLRAA 474

  Fly   329 IGNQRFVVGYGLSEMGG----------LSKNVGGPVGCEGKVMRNVELRVLDKLKMPLGINEVGI 383
            :|.|.: .|||.:|...          .|.:||.|:.|     .:::|...::|.......| |.
  Rat   475 LGCQVY-EGYGQTECTAGCTFTTPGDWTSGHVGAPLPC-----NHIKLVDAEELNYWTSKGE-GE 532

  Fly   384 IYARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQ-IYPE 447
            |..:....:.||.::.:.|:.||.||| |..|||||....||.|.|..|...:||....: :.||
  Rat   533 ICVKGPNVFKGYLKDEDRTKEALDSDG-WLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPE 596

  Fly   448 QIEEFILRLPGVSEACVFGIPDAVSTNLTACAV 480
            :||...:|...|::..|.|  |::...|....|
  Rat   597 KIENIYIRSEPVAQIYVHG--DSLKAFLVGIVV 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 123/550 (22%)
AFD_class_I 38..529 CDD:302604 119/537 (22%)
Acsl6XP_006246283.2 LC-FACS_euk 141..719 CDD:341250 118/522 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343008
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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