DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsl3

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_476448.1 Gene:Acsl3 / 114024 RGDID:70552 Length:720 Species:Rattus norvegicus


Alignment Length:609 Identity:138/609 - (22%)
Similarity:221/609 - (36%) Gaps:180/609 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PRGKDFYGPEMTLG--------EVIMRVLQI-NADQVMQ---------ICDTTGQELTGAQLA-Q 62
            |.||.|  .::.||        :|.:|.|.. |..|::.         .|:|..:.:..||.. .
  Rat   119 PNGKVF--KKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFM 181

  Fly    63 QSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEP 127
            .:.::...:..||   |..: :...|.|.:|::|.:            .|..:..:|.:..:. |
  Rat   182 YNFQLVTLYATLG---GPAI-VHGLNETEVTNIITS------------KELLQTKLKDIVSLV-P 229

  Fly   128 KVIFCDVENYHIIKTVNGKLQNPAKIYLVNGKLEGVLDISEMLNDEDSITAAAY-VPCPKLHGDH 191
            ::       .||| ||:||  .|.......|.:...:...:.|..:..:...|: .|.|    ..
  Rat   230 RL-------RHII-TVDGK--PPTWSEFPKGVIVHTMAAVQALGVKADVDKKAHSKPLP----SD 280

  Fly   192 TAFIVCSSGTTGMPKGVTRSHRSLLCNC-----KNPNTYTRDSVLLSFSPLYWISGTIILLASLL 251
            .|.|:.:||:||:||||..||.:::.:.     :.|.....| |.:.:.||..:......|..|.
  Rat   281 IAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIPRLGEED-VYIGYLPLAHVLELSAELVCLS 344

  Fly   252 NGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVME--LKAQLQSIRVLIGAG 314
            :|| ||..:.|       |.:|..        |.:|...||.|:.|::  |.|.:..|.      
  Rat   345 HGC-RIGYSSP-------QTLADQ--------SSKIKKGSKGDTSVLKPTLMAAVPEIM------ 387

  Fly   315 SKVCKAVCRRMYELIGNQR--FVVGYGLSEMGGLSKNVGGPVGCEGKVMRNV------ELRVLDK 371
            .::.|.|..::.|:...||  |::.|.. :|..:||....|: |:..|.|||      .:|||..
  Rat   388 DRIYKNVMNKVNEMSAFQRNLFILAYNY-KMEQISKGCSTPL-CDRFVFRNVRRLLGGNIRVLLC 450

  Fly   372 LKMPL--------------------GINE-----------------VG--IIYARLRFK-W---- 392
            ...||                    |:.|                 ||  ::...::.| |    
  Rat   451 GGAPLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGG 515

  Fly   393 ---------------------AGYYRNPEATRRALSSD---GMWFRTGDIGYLDSEGYLYIQTRD 433
                                 .|||:|...|:.....|   ..|..|||||..|.:|.|.|..|.
  Rat   516 YFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRK 580

  Fly   434 TDVFKFNNFQ-IYPEQIEEFILRLPGVSEACV-----------FGIPDAVSTNLTACAVVRTKSP 486
            .|:.|....: :...::|..:..||.:...|.           |.:|:  ...||..|  |||..
  Rat   581 KDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPN--QKELTELA--RTKGF 641

  Fly   487 EG---ERLTADHIRNIVEHHLSGA 507
            .|   |...:..:.|.|...||.|
  Rat   642 NGTWEELCNSSEMENEVLKVLSEA 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 134/601 (22%)
AFD_class_I 38..529 CDD:302604 129/580 (22%)
Acsl3NP_476448.1 PLN02387 30..717 CDD:215217 138/609 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342962
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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