DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17999 and Acsl4

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:565 Identity:119/565 - (21%)
Similarity:201/565 - (35%) Gaps:178/565 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PRGKDFYGPEMTLG--------EVIMRVLQINA----------DQVMQICDTTGQELTGAQLA-Q 62
            |.||.|  .::.||        ||..||....:          :.:...|:|..:.:..||.. :
  Rat   110 PNGKVF--KKLILGNYKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFK 172

  Fly    63 QSARIAQAFKRLGLRRGDVVGISANNSTYL-TSVIIAALLRGIPINPLHPEFTEETVK-YMYDIT 125
            .:..:...:..|| :...|.|::.:.::|| |||                |..|..:| .:.||.
  Rat   173 YNFPLVTLYATLG-KEAVVHGLNESEASYLITSV----------------ELLESKLKAALLDIN 220

  Fly   126 EPKVIFCDVENYHII----KTVNGKLQNPAKIYLVNGKLEGVLDISEMLNDED--SITAAAYVPC 184
            ..|         |||    ||:| :.:.|          || |:|..|.:.|:  |....:.:|.
  Rat   221 CVK---------HIIYVDNKTIN-RAEYP----------EG-LEIHSMQSVEELGSKPENSSIPP 264

  Fly   185 PKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLC----NCKN-PNTYTRDSVLLSFSPLYWISGTI 244
            .:......|.::.:||:||.||||...|.:|:.    .|:. |....:|: .:.:.||..:....
  Rat   265 SRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDT-YIGYLPLAHVLELT 328

  Fly   245 ILLASLLNGCR----------------------------------------RIITNRPYSVEYLL 269
            ..::....|||                                        ||..|....|:.:.
  Rat   329 AEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMN 393

  Fly   270 QLVARHKVTFLFLASHQIALLSK-HDSDVMEL------KAQL-QSIRVLIGAGSKVCKAVCRRMY 326
            .:   .|..|.....:::..:.| :|:.:..|      ||.| .::|:::..|:.:.....|.| 
  Rat   394 YI---QKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALLGGNVRMMLSGGAPLSPQTHRFM- 454

  Fly   327 ELIGNQRFVV----GYGLSEMGG----------LSKNVGGPVGCEGKVMRNVELRVLD------- 370
                |..|..    ||||:|..|          .:..||.|:.|       .|:::.|       
  Rat   455 ----NVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLIC-------CEIKLKDWQEGGYT 508

  Fly   371 -------KLKMPLGINEVGIIYARLRFKWAGYYRNPEATRRALSSD---GMWFRTGDIGYLDSEG 425
                   :.::.:|...:.:          ||::|.|.|....|.|   ..||.|||||....:|
  Rat   509 VHDKPNPRGEIVIGGQNISM----------GYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDG 563

  Fly   426 YLYIQTRDTDVFKFNNFQ-IYPEQIEEFILRLPGVSEACVFGIPD 469
            .|.|..|..|:.|....: :...::|..:...|.:...|.|...|
  Rat   564 CLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSD 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 115/557 (21%)
AFD_class_I 38..529 CDD:302604 109/536 (20%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 114/552 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342840
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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