DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and acsm3

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_002932029.3 Gene:acsm3 / 100491087 XenbaseID:XB-GENE-486978 Length:581 Species:Xenopus tropicalis


Alignment Length:531 Identity:121/531 - (22%)
Similarity:215/531 - (40%) Gaps:85/531 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DTTGQELTGA--QLAQQSARIAQAFK-RLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLH 110
            |.:|:|:..:  :|...|.:.|.... ...|:.||.|.:..........:.:|.:..|:.:.|..
 Frog    82 DGSGEEVKWSFEELGFLSRKAANVLSDACNLKPGDRVIVILPRVPEWWLLNVACIRAGVVLIPGT 146

  Fly   111 PEFTEETVKYMYDITEPKVIF---CDVENYHIIKTVNGKLQNPAKIYLVNGKLEGVLD---ISEM 169
            .:.|.:.:.:....:..|.|.   |.||....:...:..||  .|:.:...:.:|.||   :.::
 Frog   147 TQLTAKDILHRLQTSMAKCIITSDCLVEAVDSVAAQSPFLQ--TKMLISTERRDGWLDFKGLFQV 209

  Fly   170 LNDEDSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYTRD------ 228
            .||:.:        |.|........|..:|||||.||....||.|.....|....|..|      
 Frog   210 ANDKHT--------CVKTKSSDPMTIFFTSGTTGSPKMTEHSHCSYGLGLKVNGKYWMDLTPTDI 266

  Fly   229 ---------------SVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSVEYLLQLVARHKVT 278
                           ||   |:|  ||.|:.:...|:    .|..||      .:|:.::...:|
 Frog   267 VWNMSDTGWAKSAWSSV---FAP--WIQGSCVFAHSM----PRFDTN------IVLKTLSTFPIT 316

  Fly   279 FLFLA--SHQIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLS 341
            ....|  ::::.:|....|      .:.:|::..:.||..:...|..:..|..|...: .|||.:
 Frog   317 TFCSAPTAYRMLVLQNFAS------YKFKSLQHCVSAGEPINPQVMEQWKEQTGLDIY-EGYGQT 374

  Fly   342 E---MGGLSKNVGGPVGCEGKVMRNVELRVLDKLKMPLGINEVGIIYARLRFK-----WAGYYRN 398
            |   :.|..|.:....|..||.....::.::|:....|...:.|.|..|:..:     ::.|..:
 Frog   375 ETVLICGTFKGMKIKPGSMGKPSPAYDVEIVDENGNVLPQGKEGDIAIRILPQKPFCLFSQYTGD 439

  Fly   399 PEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEAC 463
            ||  |.|.:..|.::.|||.|..|.:||.:...|..||...:.::|.|.::|..::..|.|:|:.
 Frog   440 PE--RTASTRRGNFYLTGDRGIKDEDGYFWFVGRSDDVILSSGYRIGPFEVESALIEHPAVAESA 502

  Fly   464 VFGIPDAVSTNLTACAVVRTKSPEG---ERLT---ADHIRNIVEHHLSGAYHIRGGVYFIDSLPK 522
            |...||.:...:....||...:..|   |:|.   .:|:|||     :..|.....:.|:..|||
 Frog   503 VVSSPDPIRGEVVKAFVVLAPAYNGYDPEKLALELQEHVRNI-----TAPYKYPRKIEFVQQLPK 562

  Fly   523 TPNDKLQRRKV 533
            |.:.|::|.::
 Frog   563 TVSGKIRRNEL 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 121/531 (23%)
AFD_class_I 38..529 CDD:302604 120/525 (23%)
acsm3XP_002932029.3 MACS_euk 49..578 CDD:341251 121/531 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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