DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17999 and acsm3

DIOPT Version :9

Sequence 1:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:497 Identity:117/497 - (23%)
Similarity:208/497 - (41%) Gaps:45/497 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 QLAQQSARIAQAFKRL-GLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMY 122
            :|...|.::|...::: .|.|||.|.:..........|.:|.:..|..:.|...:.|...:::..
Zfish   102 ELGFHSRKLANVLRQVCSLERGDRVFLILPRVPEWWLVNVACIRTGTVLIPGTSQLTARDMRHRL 166

  Fly   123 DITEPKVIFCDVENYHIIKTVNGKLQNPA---KIYLVNGKLEGVLDISEMLN--DEDSITAAAYV 182
            ..:..|.:..|.....::.||  .|..|:   |:.|.:..::|..:::|::.  .:|.:      
Zfish   167 ITSGAKCVITDETLAPLLDTV--ALDCPSISTKLLLSHKPMDGWGNLTELMGRVSDDHV------ 223

  Fly   183 PCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRS----LLCNCKNPNTYTRDSVLLSFSPLYWI-SG 242
             |.....:....|..:|||||.||....||.|    |..|.:.....|...|..:.|...|. |.
Zfish   224 -CVDTSSEEPMTIFFTSGTTGSPKMTQHSHCSYGLGLTVNGRYWLDLTEQDVFWNTSDTGWAKSA 287

  Fly   243 TIILLASLLNGCRRIITNRP-YSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQS 306
            ...:.|..:.|....:.:.| :....:|:.::.:.:|....|.....:|.:.|..    |.:.|:
Zfish   288 WSSVFAPWIQGACVFVHHMPRFDTNTVLKTLSHYPITTFCTAPTAYRMLVQDDLS----KYKFQA 348

  Fly   307 IRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSE---MGGLSKNVGGPVGCEGKVMRNVELRV 368
            :...:.||..:...|..:..||.|...: .|||.:|   :.|..|.:....|..||.....:::|
Zfish   349 LEHCLCAGEPINPEVMCKWKELTGLDIY-EGYGQTETVLIAGTFKGMKIKPGSFGKASPGYDVQV 412

  Fly   369 LDKLKMPLGINEVGIIYARLR----FKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYI 429
            :|:....:...:.|.:..|::    |.....|.. |..|.|....|.::.|||.|.:|.||||:.
Zfish   413 VDENGSVVPKGQEGDLGIRVKPERPFSLFTEYTG-EPVRTAECFRGDFYLTGDRGMMDDEGYLWF 476

  Fly   430 QTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRT---KSPEGERL 491
            ..|..||.....::|.|.::|..::..|.|:|:.|...||.|...:....||.|   ||...:.|
Zfish   477 IGRSDDVILSAGYRIGPFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVVLTADFKSRAHKEL 541

  Fly   492 TAD---HIRNIVEHHLSGAYHIRGGVYFIDSLPKTPNDKLQR 530
            ..:   |:::|     :..|.....:.|:|.||||.:.|::|
Zfish   542 IKELQTHVKSI-----TAPYKYPRKIEFVDQLPKTVSGKIRR 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17999NP_611517.1 CaiC 25..545 CDD:223395 117/497 (24%)
AFD_class_I 38..529 CDD:302604 116/494 (23%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 117/497 (24%)
AFD_class_I 57..586 CDD:302604 117/497 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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