DRSC/TRiP Functional Genomics Resources

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Protein Alignment sktl and MSS4

DIOPT Version :9

Sequence 1:NP_001286646.1 Gene:sktl / 37356 FlyBaseID:FBgn0016984 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_010494.1 Gene:MSS4 / 851789 SGDID:S000002616 Length:779 Species:Saccharomyces cerevisiae


Alignment Length:625 Identity:170/625 - (27%)
Similarity:264/625 - (42%) Gaps:141/625 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LKDQPDDENEPLENQLELEQEHKSLL-----TPVKIPPAQTASPDQEAT---------PSTPPPM 68
            :|.:.:.::..|.|......:|..:|     ..:|:....|:.....||         |..|.|.
Yeast   216 IKQRRNTQDSNLPNIPFHASKHSQILPMDDSDVIKLANGDTSMKPNSATKISHSMTSLPLHPLPQ 280

  Fly    69 SLQPGTSRQLFRDAAMAHGGQETTSLLQQE--------------------LNNIAATQTPASKL- 112
            ..|......:.        .:.||||..:.                    :||...|.|.|:.| 
Yeast   281 PSQKSKQYHMI--------SKSTTSLPPENDHYYQHSRGTNHNHAANAAAVNNNTTTTTAATGLK 337

  Fly   113 RSASSTLDASISRNPSTTGGKHEKKLGHR-------RVAEGGEVTYKKIQ---SKQIMGSIQLGI 167
            ||.|:|  |.|.:...:...|.|.|...:       ||..|.:|:...:.   :..::..|::.:
Yeast   338 RSESAT--AEIKKMRQSLLHKREMKRKRKTFLVDDDRVLIGNKVSEGHVNFIIAYNMLTGIRVAV 400

  Fly   168 QHTVGSLASKPKRDLLMNDFWEMETISFPPDGSSITPAHHYNDFRFKVYAPIAFRYFRDLFGIAP 232
            ....|.:  ||   |...||...:.::|...|:.:||:..| .|:||.|.|..||..|.|||:.|
Yeast   401 SRCSGIM--KP---LTPADFRFTKKLAFDYHGNELTPSSQY-AFKFKDYCPEVFRELRALFGLDP 459

  Fly   233 DDFLMSMCAS-PLRELSNPGASGSIFYLTTDDEFIIKTVQKKECEFLQKLLPGYYMNLSQNPRTL 296
            .|:|:|:.:. .|.||::||.|||.||.:.|.::||||:...|...|:|.:..||.::..||.||
Yeast   460 ADYLVSLTSKYILSELNSPGKSGSFFYYSRDYKYIIKTIHHSEHIHLRKHIQEYYNHVRDNPNTL 524

  Fly   297 LPKFFGLY------CFHYNSKN--VRLVAMNNLLPSDIKMHCKYDLKGSSFRR-----KASKAER 348
            :.:|:||:      .|....|:  :..:.||||.|..:.:|..||||||::.|     |...|:.
Yeast   525 ICQFYGLHRVKMPISFQNKIKHRKIYFLVMNNLFPPHLDIHITYDLKGSTWGRFTNLDKERLAKD 589

  Fly   349 QKASPTFKDLDFAEHHPNGIFLETDKYNALMSTIKRDCMVLESFQIMDYSLLVGIHNLDLAAKEK 413
            :...|..|||::.|.... |.....|....::.:|:|..:|.....||||||:|||:::   |.|
Yeast   590 RSYRPVMKDLNWLEEGQK-IKFGPLKKKTFLTQLKKDVELLAKLNTMDYSLLIGIHDIN---KAK 650

  Fly   414 REERILNARAKLQRKESAAQGPPSLNPDDDAPEADQNQLQAVASYASIPGTSAGAALNRTRSMNR 478
            .::..|...|.:: ::...|||..                          |..|.          
Yeast   651 EDDLQLADTASIE-EQPQTQGPIR--------------------------TGTGT---------- 678

  Fly   479 QRLVAHSTALESITADMDVPLEEDEDVPAGGIPARSE--NDERLILYIGIIDILQSYRLEKKLEH 541
              :|.|.             ..|.|    |||.|..:  ||..||.|:||||.|.:|.:.||||.
Yeast   679 --VVRHF-------------FREFE----GGIRASDQFNNDVDLIYYVGIIDFLTNYSVMKKLET 724

  Fly   542 TFKSILYNGDTVSVCRPSFYAKRF----QDAMGKQVFKKT 577
            .::|:.::...||...|..||.||    :|::.....|||
Yeast   725 FWRSLRHDTKLVSAIPPRDYANRFYEFIEDSVDPLPQKKT 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sktlNP_001286646.1 PIPKc 183..573 CDD:214623 126/409 (31%)
MSS4NP_010494.1 MSS4 4..772 CDD:227578 170/625 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I904
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I899
Isobase 1 0.950 - 0 Normalized mean entropy S1569
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46604
orthoMCL 1 0.900 - - OOG6_100438
Panther 1 1.100 - - O PTHR23086
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.770

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