DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sktl and Pip5kl1

DIOPT Version :9

Sequence 1:NP_001286646.1 Gene:sktl / 37356 FlyBaseID:FBgn0016984 Length:792 Species:Drosophila melanogaster
Sequence 2:XP_038962106.1 Gene:Pip5kl1 / 687758 RGDID:1597527 Length:606 Species:Rattus norvegicus


Alignment Length:669 Identity:145/669 - (21%)
Similarity:226/669 - (33%) Gaps:206/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PVGKQDRLKDQPDDENEPLENQLELEQEHKSLLTPVKIPPAQTASPDQEATPSTPPPMSLQPGTS 75
            |.|.:.|.|       ..|..:..|:..::|   |. |||:|..|.:..|:....|     .|..
  Rat    19 PRGVRPRFK-------RKLRGESSLQHPNQS---PT-IPPSQNQSSEDAASSGVEP-----KGKG 67

  Fly    76 RQLFRDAA-----------MAHGGQETTSLLQQ--------ELNNIAATQTPASKLRSASSTL-- 119
            ::.||..:           :.|..|||.|...|        |:......:.|..:|..||:|:  
  Rat    68 QRRFRGLSAKRTTVTRRPFLRHLSQETQSGQDQGSEDPASPEVGPAGKGKRPPGELSPASATVAG 132

  Fly   120 -----------------------DASISRNPSTTGGKHEKKLGHR---------RVAEG------ 146
                                   .||:...|:..|.:..::||.:         |.||.      
  Rat   133 RPFPRYLSRRQAALKDQDQSSEDAASLEVGPAGKGKRPSRRLGRKVTGTPRLAVRNAEAEPDSCN 197

  Fly   147 ------------GEVTYKKIQSKQIMG-SIQLGIQHT------------------VGSLASKPKR 180
                        |.:....:.|::|.. |:.:|.:.|                  ||.....|..
  Rat   198 PASEPNQEKLHLGAMAALSLGSREIPSHSLDVGNRSTSSGSRRGLFWHLRAKHSRVGLFEIGPGH 262

  Fly   181 DL------LMNDFWEMETISF--PPDGS-------SITPAHHYNDFRFKVYAPIAFRYFRDLFGI 230
            :|      :....|....:|.  ||.|.       .:....|...|.....|..||...|...|:
  Rat   263 ELHRMTRMMQEGLWAATQVSMNNPPTGPPTQKDFLEVMTQVHKEGFELGTLAGPAFARLRQSIGL 327

  Fly   231 APDDFLMSM-CASPLRELSNPGASGSIFYLTTDDEFIIKTVQKKECEFLQKLLPGYYMNLSQNPR 294
            ..:|:..:: ...|..:..:...|.:.|:|:.|..|.:||.:::|.:.|...||.|..:|.|.|.
  Rat   328 TEEDYQATLGPGDPYLQFLSTSKSKASFFLSHDQRFFVKTQRRQEVQVLLAHLPRYVRHLQQYPH 392

  Fly   295 TLLPKFFGLYCFHY-NSKNVRLVAMNNLLPSDIKMHCKYDLKGSSFRRKASKAERQKASP---TF 355
            :||.:..|:|.... ..|....:.|..:.....::..:||:||....|.....  .:.||   ..
  Rat   393 SLLARLLGVYSLRVAQGKKKYFIIMQCIFYPTSRISERYDIKGCEVSRWVDPV--PEGSPLLLVL 455

  Fly   356 KDLDFAEHHPNGIFLETDKYNALMSTIKR----DCMVLESFQIMDYSLLVGIHNLDLAAKEKREE 416
            |||:|.|        :|.|.....|...|    |...|....::|||||||:..|.  ..||.:.
  Rat   456 KDLNFRE--------KTIKLGTQRSWFLRQMALDTAFLRELNVLDYSLLVGVQFLH--KDEKVDY 510

  Fly   417 RILNARAKLQRKESAAQG-PPSLNPDDDAPEADQNQLQAVASYASIPGTSAGAALNRTRSMNRQR 480
            ..|....|      :.|| |.|.|.|                                 ..||:.
  Rat   511 HCLIGTIK------SVQGAPKSENKD---------------------------------GQNRRM 536

  Fly   481 LVAHSTALESITADMDVPLEEDEDVPAGGIPARSENDERLILYIGIIDILQSYRLEKKLEHTFKS 545
            |.....||..:            |.|          |:|  .::|::|:...|...|:|||.:|.
  Rat   537 LPNLPNALHIV------------DGP----------DQR--YFLGLVDLTTVYGFRKRLEHLWKM 577

  Fly   546 ILYNGDTVSVCRPSFYAKR 564
            :.|.|.:||...|:.||:|
  Rat   578 VRYPGQSVSTVSPAHYARR 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sktlNP_001286646.1 PIPKc 183..573 CDD:214623 96/401 (24%)
Pip5kl1XP_038962106.1 PHA03307 16..>203 CDD:223039 39/199 (20%)
PIPKc_PIP5KL1 262..604 CDD:340441 97/410 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23086
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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