DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sktl and Pip5k1a

DIOPT Version :9

Sequence 1:NP_001286646.1 Gene:sktl / 37356 FlyBaseID:FBgn0016984 Length:792 Species:Drosophila melanogaster
Sequence 2:XP_038958707.1 Gene:Pip5k1a / 365865 RGDID:1306127 Length:561 Species:Rattus norvegicus


Alignment Length:541 Identity:266/541 - (49%)
Similarity:345/541 - (63%) Gaps:70/541 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KLRSASSTLDASISRNPSTTGGKHEKKLGHRRVAEGGEVTYKKIQSKQIMGSIQLGIQHTVGSLA 175
            |..:||.....::|..|..: ....||:|||.|...||.||||..|..:.|:|||||.||||||:
  Rat    37 KRAAASGIKRGTVSEGPYAS-LMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLS 100

  Fly   176 SKPKRDLLMNDFWEMETISFPPDGSSITPAHHYNDFRFKVYAPIAFRYFRDLFGIAPDDFLMSMC 240
            :||:||:||.||:.:|:|.||.:||::||||||||||||.|||:||||||:||||.|||:|.|:|
  Rat   101 TKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLC 165

  Fly   241 ASPLRELSNPGASGSIFYLTTDDEFIIKTVQKKECEFLQKLLPGYYMNLSQNPRTLLPKFFGLYC 305
            :.||.||||.|||||:||:::||||||||||.||.||||||||||||||:||||||||||:||||
  Rat   166 SEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYC 230

  Fly   306 FHYNSKNVRLVAMNNLLPSDIKMHCKYDLKGSSFRRKASKAERQKASPTFKDLDFAEHHPNGIFL 370
            .....||:|:|.||||||..:|||.|||||||:::|:||:.||:|..||||||||.:..|:|:||
  Rat   231 VQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFL 295

  Fly   371 ETDKYNALMSTIKRDCMVLESFQIMDYSLLVGIHNLDLAAKEKREERILNARAKLQRKESAAQGP 435
            :.|.|:||..|::|||:||:||:|||||||:.|||:|.|.:|.     :|:..:.          
  Rat   296 DADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREP-----MNSETQY---------- 345

  Fly   436 PSLNPDDDAPEADQNQLQAVASYASIPGTSAGAALNRTRSMNRQRLVAHSTALESITADMDVPLE 500
             |::....||:.                                  ..:|||:|||..:......
  Rat   346 -SIDTRRPAPQK----------------------------------ALYSTAMESIQGEARRGGT 375

  Fly   501 EDEDVPAGGIPARSENDERLILYIGIIDILQSYRLEKKLEHTFKSILYNGDTVSVCRPSFYAKRF 565
            .:.:...||||||:...|||:|||||||||||||..|||||::|:::::||||||.||.|||:||
  Rat   376 VETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERF 440

  Fly   566 QDAMGKQVFKKTPTFPLKHSPSKR--------------KTSTTQLRSPASRLPPLSTPTNAVRQP 616
            |..|...||||   .|||.||:|:              ..|.|..:..||........|.|..:|
  Rat   441 QRFMCNTVFKK---IPLKPSPTKKFRSGPSFSRRSGPSGNSCTPSQPTASGEHKAQVTTKAEVEP 502

  Fly   617 IMTMSGMSTPP--PAFDDISE 635
            .:.:......|  |..::|||
  Rat   503 DIHLGRPDVLPQTPPLEEISE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sktlNP_001286646.1 PIPKc 183..573 CDD:214623 210/389 (54%)
Pip5k1aXP_038958707.1 PIPKc_PIP5K1A_like 79..454 CDD:340443 231/427 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341575
Domainoid 1 1.000 363 1.000 Domainoid score I912
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 496 1.000 Inparanoid score I1334
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1562683at2759
OrthoFinder 1 1.000 - - FOG0000462
OrthoInspector 1 1.000 - - mtm8996
orthoMCL 1 0.900 - - OOG6_100438
Panther 1 1.100 - - O PTHR23086
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X284
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

Return to query results.
Submit another query.