DRSC/TRiP Functional Genomics Resources

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Protein Alignment sktl and Pip4k2c

DIOPT Version :9

Sequence 1:NP_001286646.1 Gene:sktl / 37356 FlyBaseID:FBgn0016984 Length:792 Species:Drosophila melanogaster
Sequence 2:XP_038934240.1 Gene:Pip4k2c / 140607 RGDID:621711 Length:434 Species:Rattus norvegicus


Alignment Length:491 Identity:129/491 - (26%)
Similarity:214/491 - (43%) Gaps:103/491 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ASSTLDASISRNPSTTGG-------------KH--EKKLGHRRVAEGGEVTYKKIQSKQIMGSIQ 164
            |||::..:.:  |:..||             ||  ::|:...|.|:            .::|...
  Rat     2 ASSSVPPATA--PAAAGGPGPGFGFASKTKKKHFVQQKVKVFRAAD------------PLVGVFL 52

  Fly   165 LGIQHTVGSLASKPKRDLLMNDFWEMETISFP----PD----GSSITPAHHY-------NDFRFK 214
            .|:.|::..|.:.|   |:::...|:..:..|    ||    .|.|...:|.       :.|:||
  Rat    53 WGVAHSMELLMASP---LVLHQINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSHFKFK 114

  Fly   215 VYAPIAFRYFRDLFGIAPDDFLMSMCASPLRELSNPGASGSIFYLTTDDEFIIKTVQKKECEFLQ 279
            .|.|..||..||.|.|...|:|:|:..||..|  ..|:.|. |.::.|...:||.|..::...:.
  Rat   115 EYCPQVFRNLRDRFAIDDHDYLVSLTRSPPSE--TEGSDGR-FLISYDRTLVIKEVSSEDIADMH 176

  Fly   280 KLLPGYYMNLSQ-NPRTLLPKFFGLYCFHYNSKNVRLVAMNNLLPSDIKMHCKYDLKGSSFRRKA 343
            ..|..|:..:.: :..||||:|.|:|.....:::..::.|.|:....:.:|.|||||||...|:|
  Rat   177 SNLSNYHQYIVKCHGNTLLPQFLGMYRVSVENEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREA 241

  Fly   344 SKAERQKASPTFKDLDFAEHHPNGIFLETDKYNALMSTIKRDCMVLESFQIMDYSLLVGIHNLDL 408
            |..|:.|..||.||:||...:.. :::..::....:..:|||...|...:|||||||:|||:: :
  Rat   242 SDKEKVKELPTLKDMDFLNKNQK-VYIGEEEKKVFLEKLKRDVEFLVQLKIMDYSLLLGIHDI-I 304

  Fly   409 AAKEKREERILNARAKLQRKESA------AQGPPSLNPDDDAPEADQNQLQAVASYASIPGTSAG 467
            ...|..||      ..::.:||.      ..|||:|                |.||.:.| ...|
  Rat   305 RGSEPEEE------GPVREEESEWDGDCNLTGPPAL----------------VGSYGTSP-EGIG 346

  Fly   468 AALNRTRSMNRQRLVAHSTALESITADMDVPLEEDEDVPAGGIPARSENDERLILYIGIIDILQS 532
            ..::..|.:.                    |.|.:..:....|.:.....::.:.::|:||||..
  Rat   347 GYIHSHRPLG--------------------PGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQ 391

  Fly   533 YRLEKKLEHTFKSILYN-GDTVSVCRPSFYAKRFQD 567
            |..:||..|..|::.:. |..:|...|..|||||.|
  Rat   392 YDAKKKAAHAAKTVKHGAGAEISTVHPEQYAKRFLD 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sktlNP_001286646.1 PIPKc 183..573 CDD:214623 112/408 (27%)
Pip4k2cXP_038934240.1 PIPKc 46..431 CDD:421701 118/433 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1562683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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