DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment insc and insc-1

DIOPT Version :9

Sequence 1:NP_477024.1 Gene:insc / 37355 FlyBaseID:FBgn0011674 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001368642.1 Gene:insc-1 / 174205 WormBaseID:WBGene00018392 Length:715 Species:Caenorhabditis elegans


Alignment Length:692 Identity:136/692 - (19%)
Similarity:245/692 - (35%) Gaps:170/692 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HQQNLSP-------------------PSPQSDKQ---------------QTPAATPTSVHSVATP 128
            |||.||.                   |:|:|..|               .:.:...||:.:::.|
 Worm    32 HQQWLSSLANARDDELQTILYAKPLLPTPESIVQLPDEEYYGAKKISVGYSKSMLSTSLGNISAP 96

  Fly   129 PTVVRRV-----GNSSFYSPLISVTRRISFT---SGQITPKTRSGD-------------EDAEDA 172
            |...||:     |.:...:.|..:..|.|..   :..::.|..|..             .|.|||
 Worm    97 PKPQRRIARLRSGANDCAASLPQLLERNSIAEMMNNSLSDKYNSSSTTLCSSVHAESCPTDTEDA 161

  Fly   173 -----ELEASRSRLFEQLDSMKLDDGEAEAEEDSPPRPAIRRRRRLMRKPMPEPEAASASEEEEV 232
                 :|...|..:...|...................|:..:.:.|.|..|    .:|...:...
 Worm   162 IIRNIKLPGFRGNISRALSQKSNSPSGCRTPTPKTAPPSYEQFQVLRRNSM----KSSVQPQRNG 222

  Fly   233 VIAPPPPPPYNNETVYLGEAPPPYNNETVTFGATEQ---------DESLQQQPSPLRVRSLRFTA 288
            :::|.||.|.::..          |..||.....:|         |.:.....||...||...|:
 Worm   223 ILSPAPPVPTSSRA----------NTITVNGAHVQQAMNRIDMSTDSANTILRSPYSTRSDSITS 277

  Fly   289 STSTPKSGSKIAKRGKKHPEPVASWMSEQRWAGEPEVMCTLQHKS-----IAQEAYKNYTITTSA 348
            ..|...||.:|.:|..                      |:.:.:|     ....:|.....|.. 
 Worm   278 VDSGQCSGDQIERRSN----------------------CSTRQESKDDDDTGMPSYARMASTMD- 319

  Fly   349 VCKLVRQLQQQALSLQVHFERSERVLSGLQASSLPEALAGATQLLSHLDDFTATLERRGVFFNDA 413
                             |..|:...|..|.:|:|..|.  ...||:....|...||.........
 Worm   320 -----------------HVLRTSSALYTLLSSALDPAT--CRDLLAKSSVFIQLLESSPCTNYLP 365

  Fly   414 KIERRRYEQHLEQIRTVSKDTRYSLERQHYINLESLLDDVQLLKRHTLITLRLIFERLVRVLVIS 478
            |.|..|.:.::::::. ::|       :..|::.::.:...:|.|.::.::.|:|.|:       
 Worm   366 KTEMARLKMNVQELQK-NRD-------KGIIDMNNMTNFFAILLRKSIESVLLVFVRI------- 415

  Fly   479 IEQSQCDLLLRANINMVAT--LMNIDYDGFASLSDAFVQNEAVRTLL-VVVLDHKQSSVRALALR 540
            |.::.|:...:..:..:..  |::|...|.....:| :|...:.::: ::..|..|.:.....||
 Worm   416 ISKNLCESNGKDRLTPICLEHLIHICLFGDELCIEA-IQKGCISSVIRIMKNDQPQENTLRFLLR 479

  Fly   541 ALATLCCAPQAINQLGSCGGIEIVRD-ILQVESAGERGAIERREAVSLLAQIT---AAWHGSEHR 601
            .||.||...:....|.:.||:::|.| :|.:.|     :|...||..:|.|:|   :|:....| 
 Worm   480 TLAVLCGVSKGALALLTQGGLDLVIDRLLSISS-----SICSVEAAGILTQLTNPQSAFIRLNH- 538

  Fly   602 VPGLRDCAESLVAGLAALLQPECCTQTLLLCAAALNNLSRMEATSHYSIMSNEAIFRLIDTLEHQ 666
                   .|.:::.|..|:.......:|||..|||||::.........:..|.:|.|||.....:
 Worm   539 -------VEPIISRLLDLIDQCKSGDSLLLATAALNNVTLQNPNGVDIMYRNNSIRRLISAYNRE 596

  Fly   667 TCGTSVFLYEQIVGMLHNMSLNKKCHSHL---ANGVIINFIT 705
            .|.| ||:.||||.....::.....|..:   |..|::.|::
 Worm   597 NCAT-VFVQEQIVTAFSRLAARHLDHQMVDQNAIPVLLEFLS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inscNP_477024.1 MSS4 <62..>142 CDD:227578 16/82 (20%)
insc-1NP_001368642.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164150
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008516
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21386
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.990

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