DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KARS1 and LysRS

DIOPT Version :10

Sequence 1:NP_001123561.1 Gene:KARS1 / 3735 HGNCID:6215 Length:625 Species:Homo sapiens
Sequence 2:NP_727353.1 Gene:LysRS / 31904 FlyBaseID:FBgn0027084 Length:607 Species:Drosophila melanogaster


Alignment Length:617 Identity:406/617 - (65%)
Similarity:481/617 - (77%) Gaps:20/617 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLTQAAVRLVRGSLRKTSWAEWGHRELRLGQLAPFTAPHKDKSFSDQRSELKRRLKAEKKVAEKE 65
            |..:.|:|.|:||..:..:.  |.:.|..|  ...:||..:.| ...:.|||||||||:|..||.
  Fly     1 MFARCALRTVQGSWPRCRYT--GIQPLAAG--FHVSAPQMEPS-KQTKLELKRRLKAEQKAKEKA 60

Human    66 AKQKELSEKQLSQATAAATNHTT--DNGVGPEEESVDPNQYYKIRSQAIHQLKVN-GEDPYPHKF 127
            .|           |.||...:|.  ......|||.:.||:|:|:||.|:.:||.: ..|||||||
  Fly    61 EK-----------AAAAPAENTAGKKKSSAAEEEEISPNEYFKLRSAAVQELKRSPATDPYPHKF 114

Human   128 HVDISLTDFIQKYSH-LQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNY 191
            ||..||.|||.||.: |:.|:.|.::.|.||||:||.|.||.|||||||||||||:||||::::|
  Fly   115 HVSSSLEDFIAKYENSLKEGETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSY 179

Human   192 KSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYR 256
            |||.:|....:||||||||||.|:||||||||||::|.||.||||||||||||||||||||||||
  Fly   180 KSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKDKETRYR 244

Human   257 QRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMN 321
            |||||||||:.||:||.||:|||:|:|.|||.||||||||||||:|.|||.||||:|:||:|.|:
  Fly   245 QRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMD 309

Human   322 LYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMV 386
            |:||||||||||||||||:|||||||||||||||||||||||||||||||||||.|:|:|||::|
  Fly   310 LFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYADIMDITEQLV 374

Human   387 SGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKIL 451
            |||||.|.|||||.|||:||||...::||||||:|::|::.||:.|.:|.|..:.|.:.||.:.|
  Fly   375 SGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFL 439

Human   452 DDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFEL 516
            ..:|....||||.|||||||||||||||:|..|:||||||:||||||||||:|||..||||||||
  Fly   440 SQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQIMSPLAKYHRSIPGLTERFEL 504

Human   517 FVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDR 581
            ||.||||||||||||||:.||:.||:||..||||||||..:||||||:||||||||.|:||||||
  Fly   505 FVAKKEICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDR 569

Human   582 VAMFLTDSNNIKEVLLFPAMKPEDKKENVATT 613
            :|||||||||||||||||||||||.....|.|
  Fly   570 LAMFLTDSNNIKEVLLFPAMKPEDANRTAAET 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KARS1NP_001123561.1 PLN02502 48..605 CDD:215278 390/560 (70%)
LysRSNP_727353.1 PLN02502 42..593 CDD:215278 390/561 (70%)

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