DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and Marchf8

DIOPT Version :9

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_006506702.1 Gene:Marchf8 / 71779 MGIID:1919029 Length:568 Species:Mus musculus


Alignment Length:260 Identity:70/260 - (26%)
Similarity:99/260 - (38%) Gaps:66/260 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 HPSHPLVSTEAVLAAATSSSYSAGPPKAAATD----------SIATLRHCV----------DGAT 144
            |..|.|.|..:.|..|.|||:.||.....:.:          |.|.|::.|          |...
Mouse   271 HRFHELESHASHLHTAKSSSWLAGSMDFCSDEMGDDDVFEDTSSAKLKNRVLRAPLCSVEKDSDL 335

  Fly   145 QCNNLNYESASNESMPSVGSLVCRICH-NADNPEQLVSPCLCKGSLTYVHVHCLECWISTSRCTT 208
            .|.:|..|..:..|..|.....||||| ..|:...|::||.|.|||.:||..||:.||.:|....
Mouse   336 DCPSLLSEKCTPISPVSTSGDACRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRC 400

  Fly   209 CELCQFQYNTEQTLRYTCLQSLRLWYSRAMS---RRALQEDCQMFSLLTLVAFGIIGTLLVGIQY 270
            ||||::::..|     |.|:.||.|....|:   ||         .::..|.|.:|....|....
Mouse   401 CELCKYEFIME-----TKLKPLRKWEKLQMTASERR---------KIMCSVTFHVIAITCVVWSL 451

  Fly   271 YALHTHS--------------WGLSKLWTKSWMLFFLFMTITVYFAN----IYMLIKSQLTPWYR 317
            |.|...:              |   ..|||       .:.:.:.|..    :|:..|..|..|.|
Mouse   452 YVLIDRTAEEIKQGQVTGILEW---PFWTK-------LVVVAIGFTGGLLFMYVQCKVYLQLWKR 506

  Fly   318  317
            Mouse   507  506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 AmyAc_family <36..>151 CDD:298606 18/70 (26%)
RINGv 166..213 CDD:128983 23/47 (49%)
Marchf8XP_006506702.1 RING_CH-C4HC3_MARCH1_like 357..408 CDD:319612 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X270
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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