DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and CG4080

DIOPT Version :10

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster


Alignment Length:243 Identity:67/243 - (27%)
Similarity:112/243 - (46%) Gaps:39/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 NLNYESASNESMPSVGSLVCRICHNADNPEQ-LVSPCLCKGSLTYVHVHCLECWISTSRCTTCEL 211
            |:.:.|.|:::..:.|. :|||||...:|:. |::||.|.|||.|||..||:.|::.|...:|||
  Fly    25 NVRFGSGSSQASQNSGD-ICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCEL 88

  Fly   212 CQFQYNTEQTLRYTCLQSLRLWYSRAMS---RRALQEDCQMFSLLTLVAFGIIGTLLVGIQYYAL 273
            |:|.:     :.:|.::....|.|..:|   ||.|   |.........|..:|.:|.|.|:..|.
  Fly    89 CKFPF-----IMHTKIKPFNEWRSLDISGIERRRL---CYSVLFHCAAALCVIWSLCVLIERAAD 145

  Fly   274 HTH----SWGLSKLWTKSWMLFFLFMTITVYFANIYMLIKSQLTPWYRWWQSARDIKLILENRRP 334
            ...    .|   ..|||   |..:.:.:|.....:|:..|:.|...:||  .||:..|:::|.  
  Fly   146 DVQRGLIDW---PFWTK---LAVVTVGLTGGIVFMYIQCKAYLHLCHRW--KARNRILLIQNA-- 200

  Fly   335 FPNPSRFLRSFQLETVSTTASMYTHHDQQEAPVP---SSSPVIVITSS 379
               |.:      :..|:..:.:..||.....|:.   |:|..:.|.:|
  Fly   201 ---PEK------IHPVAPPSPVAAHHQHFSEPLAHAGSTSGAVEINAS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 RINGv 166..213 CDD:128983 23/47 (49%)
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 25/50 (50%)

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