DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and Marchf10

DIOPT Version :10

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_063125263.1 Gene:Marchf10 / 303596 RGDID:1311692 Length:797 Species:Rattus norvegicus


Alignment Length:357 Identity:80/357 - (22%)
Similarity:122/357 - (34%) Gaps:112/357 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPPGMIVVETRISSWQKVKCYDKDGTTADAEDP 80
            |.|:.|.||.::...      ..|.|.|.::||..    .|.|.|:.|.    .:....:|..:|
  Rat   500 RFNVRRPLSPIRNRN------PSAASESHSEDTQG----EEERASTSQA----QESPLLSDLPNP 550

  Fly    81 QIPACSLGLKPNVQFQKLPHPSHPLVSTEAVLAAATSS----SYSAGPPKAAATDSIATLRHCVD 141
            | .:.:||..|:       .|:...:.....:..:...    ::.|....|:..|:..::|  |.
  Rat   551 Q-SSMALGDSPS-------SPTRRHLQGHFYMPGSLQENIPFTFFAVSDFASQNDNGTSVR--VS 605

  Fly   142 G-----ATQCN------NLNYESASNESMPSVGSLVCRICHNAD----NPEQLVSPCLCKGSLTY 191
            |     ||:..      ....||...|.....|.| ||||..|.    ||  |:.||.|.|||.:
  Rat   606 GVMDEKATEIKADPEKLRKLQESLLEEDSEEEGDL-CRICQIAGGSPANP--LLEPCGCVGSLQF 667

  Fly   192 VHVHCLECWIST--------SRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDCQ 248
            ||..||:.|:..        |...|||:|                           ::.|..|..
  Rat   668 VHQECLKKWLKVKITSGADLSTVKTCEMC---------------------------KQGLLVDLD 705

  Fly   249 MFSLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVYFANIYMLIKSQLT 313
            .|::               .::|..|..|...|:|......|..|.......||.:       :|
  Rat   706 DFNM---------------TEFYHKHQQSRAQSELMNSGLYLVLLLHLYEQRFAEL-------MT 748

  Fly   314 PWYRWWQSARDIKLILENRRPFPNP----SRF 341
            ..||  :::|:   .:....|.|.|    |||
  Rat   749 LNYR--RASRE---RMSRNYPQPRPEESESRF 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 RINGv 166..213 CDD:128983 23/58 (40%)
Marchf10XP_063125263.1 None

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