DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and Marchf10

DIOPT Version :9

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001013995.1 Gene:Marchf10 / 303596 RGDID:1311692 Length:790 Species:Rattus norvegicus


Alignment Length:350 Identity:77/350 - (22%)
Similarity:119/350 - (34%) Gaps:110/350 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPPGMIVVETRISSWQKVKCYDKDGTTADAEDP 80
            |.|:.|.||.::...      ..|.|.|.::||..    .|.|.|:.|.    .:....:|..:|
  Rat   500 RFNVRRPLSPIRNRN------PSAASESHSEDTQG----EEERASTSQA----QESPLLSDLPNP 550

  Fly    81 QIPACSLGLKPNVQFQKLPHPSHPLVSTEAVLAAATSS----SYSAGPPKAAATDSIATLRHCVD 141
            | .:.:||..|:       .|:...:.....:..:...    ::.|....|:..|:..::|  |.
  Rat   551 Q-SSMALGDSPS-------SPTRRHLQGHFYMPGSLQENIPFTFFAVSDFASQNDNGTSVR--VS 605

  Fly   142 G-----ATQCN------NLNYESASNESMPSVGSLVCRICHNAD----NPEQLVSPCLCKGSLTY 191
            |     ||:..      ....||...|.....|.| ||||..|.    ||  |:.||.|.|||.:
  Rat   606 GVMDEKATEIKADPEKLRKLQESLLEEDSEEEGDL-CRICQIAGGSPANP--LLEPCGCVGSLQF 667

  Fly   192 VHVHCLECWIST--------SRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDCQ 248
            ||..||:.|:..        |...|||:|                           ::.|..|..
  Rat   668 VHQECLKKWLKVKITSGADLSTVKTCEMC---------------------------KQGLLVDLD 705

  Fly   249 MFSLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVYFANIYMLIKSQLT 313
            .|::               .::|..|..|...|:|......|..|.......||.:       :|
  Rat   706 DFNM---------------TEFYHKHQQSRAQSELMNSGLYLVLLLHLYEQRFAEL-------MT 748

  Fly   314 PWYRWWQSARDIKLILENRRPFPNP 338
            ..||  :::|:     ...|.:|.|
  Rat   749 LNYR--RASRE-----RMSRNYPQP 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 AmyAc_family <36..>151 CDD:298606 24/129 (19%)
RINGv 166..213 CDD:128983 23/58 (40%)
Marchf10NP_001013995.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..240
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..416
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..569 18/83 (22%)
RING_CH-C4HC3_MARCH10 641..700 CDD:319727 24/87 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 757..790 2/14 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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