DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and marc-6

DIOPT Version :9

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_492823.2 Gene:marc-6 / 172986 WormBaseID:WBGene00018847 Length:1025 Species:Caenorhabditis elegans


Alignment Length:316 Identity:67/316 - (21%)
Similarity:112/316 - (35%) Gaps:88/316 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PPKAAATDSIATLRHCVDGATQCNNLNYESASNE--SMPSVGS----LVCRICHNADNPEQLVSP 182
            ||:..|....|:.|    .:|...|.|.|....:  |.|.:..    |:||:|..  |...|..|
 Worm     8 PPEHEAGSVDASNR----PSTSSENPNPEEPCPQPPSDPIIDDNDDHLMCRVCRG--NEGSLYYP 66

  Fly   183 CLCKGSLTYVHVHCLECWISTSRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDC 247
            |||.||:.|||..||..|:..|:...||||..:|:.:...|                    |:..
 Worm    67 CLCTGSIKYVHQECLVEWLKYSKKEVCELCNHKYSFQPIYR--------------------QDMP 111

  Fly   248 QMFSLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVYFANIYMLIKSQL 312
            :...:|.::.    |.|:.|    |:...:|.:..:...:|:.........:|....|:.....:
 Worm   112 KALPILEILR----GVLISG----AIMVRTWIIYTIVMTTWLGIVPLTAARIYNCIFYLSFHDIV 168

  Fly   313 TPWYRWWQSARDIKLILENRRPFPNPSRFLRSFQLETVSTTASMYTHHDQQEAPVPSSSPVIV-- 375
            ...::.:::......||:.       |..|..|    |.|..|:....:|          :|:  
 Worm   169 NAPFQLFKAEHFFNDILKG-------SLLLLVF----VCTFISLVWLREQ----------IIIGG 212

  Fly   376 ------ITSSEEETEDKLAHKWGTRLDSEVLAAVVAATVESIADASARESDKQDED 425
                  |.:.|.|.||.:.:                   |:...:...|.|::|||
 Worm   213 PQHFLNIEAEENEGEDDVVN-------------------ENNESSDESEDDEEDED 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 AmyAc_family <36..>151 CDD:298606 7/26 (27%)
RINGv 166..213 CDD:128983 21/46 (46%)
marc-6NP_492823.2 SSM4 47..1016 CDD:227510 56/273 (21%)
RING_CH-C4HC3_MARCH6 52..98 CDD:319616 22/47 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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