DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13442 and marchf1

DIOPT Version :9

Sequence 1:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_031751326.1 Gene:marchf1 / 100495418 XenbaseID:XB-GENE-486265 Length:519 Species:Xenopus tropicalis


Alignment Length:437 Identity:102/437 - (23%)
Similarity:160/437 - (36%) Gaps:118/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CEKCDITSNAGDHRLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPPGMIVVETRISSWQKVKC 67
            ||.|   .::|..|        :|||....: ......:.||:||    ......|:...:|||.
 Frog   122 CETC---MHSGYER--------NLKPGMEAQ-RFGPTDTDSSSDD----QHWATARMRRSEKVKV 170

  Fly    68 YDKD-------------GTTADAEDPQIPACSLGLKPNVQFQKLPHPSHPLVST-------EAVL 112
            :.|.             ..|...|...:| |....:||...|   :|:....||       |...
 Frog   171 FKKGRRREKSRQVYEGFSDTNTIEMASLP-CKNSTEPNTYSQ---YPTSVNNSTSYRRRRKELKC 231

  Fly   113 AAATSSSYSAG-PPKA---AATDSIATLRHCVDGATQCNNLNYESASNESMPSVGSL-------- 165
            .|...:.:.|. .||.   ...||:.....|.:|.....|:..|.|..:....|.::        
 Frog   232 NAPAETKHIANRKPKRKENCCKDSVKCQCFCREGNIIKKNIREEGAGADVQAPVITVPLARAPSP 296

  Fly   166 -----------VCRICH-NADNPEQLVSPCLCKGSLTYVHVHCLECWISTSRCTTCELCQFQYNT 218
                       |||||| ..|....|::||||.|:|.:||..||..||.:|....||||::.:..
 Frog   297 VNSNDVSEDLDVCRICHCEGDEENPLITPCLCTGTLRFVHQTCLHQWIKSSDTRCCELCKYDFVM 361

  Fly   219 EQTLRYTCLQSLRLWYSRAMSRRALQEDCQMFSLLTLVAFGIIGTLLVGIQYYALHTHS------ 277
            |     |.|:.||.|....|::      .:...::..|.|.||....|....|.|...:      
 Frog   362 E-----TKLKPLRKWEKLQMTK------SERSKIICSVTFHIIALTCVMWSLYVLIDRTAEEIKQ 415

  Fly   278 --------WGLSKLWTKSWMLFFLFMTITVYFAN--IYMLIKSQLTPWYRWWQSARDIKLILENR 332
                    |   ..|||       .:.:.:.|..  |:|.::.::  :.:.|:     :|...||
 Frog   416 GSENGVLEW---PFWTK-------LVVVAIGFTGGLIFMYVQCKV--YIQLWR-----RLKAYNR 463

  Fly   333 RPF----PNPSRFLRSFQLETVSTTASMYTHHDQQEA-PVPSSSPVI 374
            ..|    ||.|:     :||...:|::..|:..:..| ||..:|.::
 Frog   464 VIFVQNCPNTSK-----KLEEKDSTSNQNTNLKESVAVPVLQTSAIM 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13442NP_611511.3 AmyAc_family <36..>151 CDD:298606 29/138 (21%)
RINGv 166..213 CDD:128983 24/47 (51%)
marchf1XP_031751326.1 RING_CH-C4HC3_MARCH1_like 308..359 CDD:319612 25/50 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 70 1.000 Inparanoid score I5147
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X270
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.050

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