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Protein Alignment exu and Trex1
DIOPT Version :9
Sequence 1: | NP_001163218.1 |
Gene: | exu / 37345 |
FlyBaseID: | FBgn0000615 |
Length: | 532 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020160.1 |
Gene: | Trex1 / 100049583 |
RGDID: | 1311998 |
Length: | 316 |
Species: | Rattus norvegicus |
Alignment Length: | 122 |
Identity: | 33/122 - (27%) |
Similarity: | 48/122 - (39%) |
Gaps: | 24/122 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 369 EGLDIALQSIGRLKSKDKAELLELLDSYFDPKKTTVKPVVKGNSNNNNNYRRRNRRGGRQSVKDA 433
||..:||.||.:.|.: .||:.:|.:..| .:|:||: |......|.......|
Rat 198 EGDVLALLSICQWKPQ---ALLQWVDKHARP-FSTIKPM----------YGMAATTGTASPRLCA 248
Fly 434 RPSSSPSASTEFGAGGDKSRSVSSLPDSTTKTPSPNKPRMHRKRNSRQSLGATPNGL 490
..:|||.|:........:||. |.|:...|....:..||:.|.| |.||
Rat 249 ATTSSPLATANLSPSNGRSRG---------KRPTSPPPENVPEAPSREGLLA-PLGL 295
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
exu | NP_001163218.1 |
None |
Trex1 | NP_001020160.1 |
TREX1_2 |
14..211 |
CDD:99839 |
6/12 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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