DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fem-1 and AT5G54710

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001332664.1 Gene:AT5G54710 / 835560 AraportID:AT5G54710 Length:643 Species:Arabidopsis thaliana


Alignment Length:311 Identity:68/311 - (21%)
Similarity:132/311 - (42%) Gaps:61/311 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LNNLHLAARSGQMLSFVEILNSVSCRAVQTHLVNTNFDQP-----------------DGQSLTPL 105
            ||| ||.|    .|:.||.:.|::  .|:.....|. .||                 |.:..|.|
plant    61 LNN-HLDA----ALTLVENMRSMT--MVELDAAFTG-QQPVIIDKMLEKFPSLVLDVDEEQSTLL 117

  Fly   106 TMAAMMGNVKFVKTLLSHYDVDLDRECNVIYDGMVVYGATALWVAAGMGHLQIVKMLVQAGAA-- 168
            ..|....|.::...:     :||   |..:.....|.|.|.|.:||.:|::.|:..:::.|.|  
plant   118 HKAVTQRNEEYATKV-----IDL---CPSLVSVTNVDGNTPLHLAAEIGNINILWKMLETGEAEC 174

  Fly   169 INHNTKAQSSPLRAACYEGRLDIVEFLIDNGADVNATNLFNNNTLMIAAY-KGHHLVVKTLLQNG 232
            :..|.:.|::.: .||....::....|::..:.:....|       .||: :...:::.::|:..
plant   175 MKINKQGQTAFI-LACLNNNVNSARILVEGTSSMTMVEL-------NAAFSEQQQVIIDSILEKF 231

  Fly   233 SR----ANDQALCGATALHYAAESGHLDVVVALLD----HGATLKKNELGITPALQAAERLHEDV 289
            ..    |:::.   :|.||.|.:||:|::...|||    .....|.::.|:||..:|......::
plant   232 PNLILDADEEQ---STLLHKACKSGNLEMARTLLDVDVNQEIAEKVDKDGLTPLHRAVINGSVEI 293

  Fly   290 LEAFI-ERPELMSLEEQITALELLGATYANDKIKYDVNKAYGYLLRAMQLR 339
            |:.|: :.|...::..|.|.     .|..:...||...||:.::.::..:|
plant   294 LKEFLCKAPSSFNITTQGTI-----ETVFHLAAKYQKTKAFIFMAQSANIR 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 33/153 (22%)
ANK repeat 103..129 CDD:293786 5/25 (20%)
Ank_2 105..206 CDD:289560 21/102 (21%)
ANK 142..262 CDD:238125 26/126 (21%)
ANK repeat 142..173 CDD:293786 9/32 (28%)
ANK repeat 178..206 CDD:293786 3/27 (11%)
Ank_2 180..266 CDD:289560 18/94 (19%)
ANK repeat 208..239 CDD:293786 4/35 (11%)
ANK repeat 241..266 CDD:293786 10/28 (36%)
Ank_4 244..294 CDD:290365 16/53 (30%)
ANK 548..685 CDD:238125
ANK repeat 548..594 CDD:293786
ANK repeat 596..636 CDD:293786
AT5G54710NP_001332664.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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