DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fem-1 and AT4G03470

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001319861.1 Gene:AT4G03470 / 827915 AraportID:AT4G03470 Length:683 Species:Arabidopsis thaliana


Alignment Length:366 Identity:89/366 - (24%)
Similarity:137/366 - (37%) Gaps:94/366 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVDPA------EEAPLDEAHTSIYDGYPPDFGYFNMAHGMLVEISEEIRAKFPHEPRLRFSQLN 59
            |||..|      .::.:|.:|.....      |||:|                        :::|
plant     1 MDVSEARLSRIESQSSIDSSHDQRRQ------GYFSM------------------------NKIN 35

  Fly    60 NLHLAARSGQMLSF-------VEILNSVSCRAVQTHLVNTN----FDQPDGQSLTPLTMAAMMGN 113
            |   ..||.....|       :.:....:.:.|...|||..    ||.|....|....|.:.:||
plant    36 N---GLRSLSSRGFLRNRGKAIPLPMKDTEKTVPEFLVNLKFSDLFDLPGEYVLMNAEMLSTLGN 97

  Fly   114 VKFVKTLLSHYD----VDLDRECNVIYDGMVVYGATALWVAAGMGHLQIVKMLVQAGAAI--NHN 172
            .::::.|.||..    :..||            |.:.|.:||...||::||.:|...:.:  ..|
plant    98 EEWLEKLRSHGTPLTCLKNDR------------GDSVLHLAATWSHLELVKNIVSECSCLLMESN 150

  Fly   173 TKAQSSPLRAACYEGRLDIVEFLIDN---------GADVNATNLF-----NNNTLMIAAYKGHHL 223
            :|.| .||..|...|.|.:||.|:.:         ..|....|.:     |.:|.:..|.|||:.
plant   151 SKDQ-LPLHVAARMGHLAVVEDLVASVTFFSARLAEEDREILNPYLLKDINGDTALNLALKGHYT 214

  Fly   224 VVKTLLQNGSRANDQALC--GATALHYAAESGHLDVVVALLDHGATLKKNELGITP----ALQAA 282
            .|...|.|.:|......|  |.:.|:.|.|:....:|.|:|.:....:|| |.:..    |..|.
plant   215 EVALCLVNANRQASFLACKDGISPLYLAVEAKDASLVKAMLGNDGPQRKN-LNLEGRKYLAHAAL 278

  Fly   283 ERLHEDVLEAFI-ERPELMSL--EEQITALELLGATYANDK 320
            ..|..|:|:..: |.|.|:..  ||..|.|. .||:....|
plant   279 NSLSTDILDVILNEYPSLVDERDEEGRTCLS-FGASIGYHK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 38/151 (25%)
ANK repeat 103..129 CDD:293786 6/29 (21%)
Ank_2 105..206 CDD:289560 29/115 (25%)
ANK 142..262 CDD:238125 39/137 (28%)
ANK repeat 142..173 CDD:293786 9/32 (28%)
ANK repeat 178..206 CDD:293786 9/36 (25%)
Ank_2 180..266 CDD:289560 27/101 (27%)
ANK repeat 208..239 CDD:293786 10/35 (29%)
ANK repeat 241..266 CDD:293786 8/26 (31%)
Ank_4 244..294 CDD:290365 14/53 (26%)
ANK 548..685 CDD:238125
ANK repeat 548..594 CDD:293786
ANK repeat 596..636 CDD:293786
AT4G03470NP_001319861.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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