DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fem-1 and AT4G03500

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_192259.1 Gene:AT4G03500 / 827731 AraportID:AT4G03500 Length:652 Species:Arabidopsis thaliana


Alignment Length:491 Identity:111/491 - (22%)
Similarity:189/491 - (38%) Gaps:159/491 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VNTNFDQ-PDGQSLTPLTMAAM-MGNVKFVKTLLSHYDVDLDRECNVIYDGMVVYGATALWVAAG 152
            ::|.||: .:.:.:.|.||||: .|...::::..|:..|    ...::.|    .|.|.|.:||.
plant    55 LSTLFDETSETKPMDPKTMAAVRAGKENYLRSNNSYISV----APTLVND----RGNTILHLAAS 111

  Fly   153 MGHLQIVKMLVQ--AGAAINHNTKAQSSPLRAACYEGRLDIVEFLIDNGADVNATNL-------- 207
            .||:.:|:.::|  .|..:..|...:.: |..|...|.||:|..|||...|::.|||        
plant   112 SGHVSLVRYIIQKCPGLLLKSNMMGEVA-LHLAAEAGHLDVVWNLIDFINDISCTNLPVAKRIYF 175

  Fly   208 ---FNNNTLMIAAYKGHHLVVKTLLQNGSR-----ANDQALCGATALHYAAESGHLDVVVALLDH 264
               .|.:|.:..|.||.|.||.:.|.:.::     ||..   |.:.|:.|.|:||..:|..:. |
plant   176 AKNKNQDTALHVALKGKHEVVASYLVSAAKSLSFVANRD---GFSPLYLAIEAGHTSLVTTMC-H 236

  Fly   265 GATLKKNELGITPALQAAERLH-EDVLEAFIER-PELMSLEEQITALELLGAT---YANDKIKYD 324
            |.....:::|....:.||.:.: :|:|:|.:.: ..|::|.::.......||:   |......:|
plant   237 GTNELSSKVGGRSIVHAALKANRKDILDALLSKDASLINLRDEGRTSLSFGASIGYYQGFSYLFD 301

  Fly   325 VNKAYGYLLRAMQLRYSNPRGVIRKRVQPTVPAYDNWLETENLPELYAIKLNHHSIHMESLAIRE 389
            .|:...|:        |:..|:                    .|...|.|..|       :.|.|
plant   302 KNRDKVYV--------SDDDGL--------------------FPTHMAAKYGH-------VQILE 331

  Fly   390 RILGRNNPELPQAIIYRGAVMADQGRFYQCQVLWNYAIDLRMRNNVSVDRD---LLRFAQLFAQI 451
            .|| ::.||                           ||:|       :|||   :|..|..:.::
plant   332 EIL-KHCPE---------------------------AIEL-------LDRDGQNILHLAAKYGKL 361

  Fly   452 LRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPNACPSLWQDQNNQNCITALYLI------K 510
                       .|:..:..|.:: :|.|..|.|          ||.|..   |.|:|.      |
plant   362 -----------KVIKFILSCCKD-KNKKKLINE----------QDVNGN---TPLHLATINWHPK 401

  Fly   511 IVT-----HLARRKK------------DQNIDEEHI 529
            :|:     |....||            ::|||..:|
plant   402 VVSMFTWDHRVDLKKRNYIGFTALDVAEENIDSSYI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 29/109 (27%)
ANK repeat 103..129 CDD:293786 8/26 (31%)
Ank_2 105..206 CDD:289560 29/103 (28%)
ANK 142..262 CDD:238125 42/137 (31%)
ANK repeat 142..173 CDD:293786 10/32 (31%)
ANK repeat 178..206 CDD:293786 10/27 (37%)
Ank_2 180..266 CDD:289560 32/101 (32%)
ANK repeat 208..239 CDD:293786 11/35 (31%)
ANK repeat 241..266 CDD:293786 8/24 (33%)
Ank_4 244..294 CDD:290365 14/50 (28%)
ANK 548..685 CDD:238125
ANK repeat 548..594 CDD:293786
ANK repeat 596..636 CDD:293786
AT4G03500NP_192259.1 Ank_2 73..166 CDD:289560 28/101 (28%)
ANK 98..231 CDD:238125 42/140 (30%)
ANK repeat 101..132 CDD:293786 10/30 (33%)
ANK repeat 135..178 CDD:293786 13/43 (30%)
Ank_2 185..278 CDD:289560 26/96 (27%)
ANK 212..368 CDD:238125 45/240 (19%)
ANK repeat 214..244 CDD:293786 9/33 (27%)
ANK repeat 246..278 CDD:293786 8/31 (26%)
ANK 311..437 CDD:238125 39/212 (18%)
ANK repeat 313..345 CDD:293786 14/93 (15%)
Ank_2 319..418 CDD:289560 34/165 (21%)
ANK repeat 347..384 CDD:293786 9/58 (16%)
ANK repeat 386..418 CDD:293786 9/34 (26%)
PGG 473..581 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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