DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fem-1 and AT4G03490

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001328102.1 Gene:AT4G03490 / 827426 AraportID:AT4G03490 Length:710 Species:Arabidopsis thaliana


Alignment Length:707 Identity:131/707 - (18%)
Similarity:218/707 - (30%) Gaps:269/707 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DQPDGQSLTPLTMAAMMGNVKFVKTLLSHYDVDLDR------ECNVI-----YDGMVV----YGA 144
            ||...|..|.|.:||:.|:...|:.:|: |::::.|      .||.:     |..::|    .|.
plant    30 DQVTFQGNTILHLAAIYGHDHLVRRILA-YELNILRNWKRGLNCNFVPSFSHYQTLLVRRNYKGD 93

  Fly   145 TALWVAAGMGHLQIVKMLVQAGAAINHNTKAQSSPLRAACYEGRLDIVEFLIDNGADV--NATNL 207
            .||.|||..||..||.:|:.                   |.......:..:|.:...|  |...:
plant    94 LALHVAAAAGHKLIVGLLID-------------------CLRQLPQDITMVIGSEQMVIGNIFRV 139

  Fly   208 FNN--NTLMIAAYKGHHLVVK-------------------------------TLLQNGSRANDQA 239
            .||  ||.:..:.||:|:.|.                               :|:::..|..|.:
plant   140 SNNDGNTALHLSLKGNHVSVSLQLVREDRSTCFLLDKEDVSPLYMAAEAGYVSLVEHMLRGLDAS 204

  Fly   240 LCGATALHYAAESGHLDVVVALLDHGATL--KKNELGITPALQAAE------------RLHEDVL 290
            ..|.:.|..|.:|.:||::.|:|:..:.|  .::|.|.||...||.            |......
plant   205 FVGKSVLCAAVKSQNLDILTAVLESDSDLVESRDEDGRTPLATAASIGYDIGVQHMLTRFASSTQ 269

  Fly   291 EAFIERPE-----------------LMSLEEQITALELL---GATYANDKIKYDVNKAYGYLLRA 335
            .|:|:..:                 .:.|:.....:|:|   |....:...|....:|.|||||.
plant   270 VAYIKNEDGSFPIHSACSARCTSALKVILKHHPDTIEMLNSQGQNVLHVAAKSGNARAVGYLLRK 334

  Fly   336 MQLR-------------------YSNPRGVI----RKRV-------------------QPTVPAY 358
            ..::                   .|:|:.|.    .:||                   ..|:|:.
plant   335 SDVKRLINEQDIEGNTPLHLASSNSHPKVVSLFIHDRRVDLKILNYKGFTALDAAEDHMATIPSL 399

  Fly   359 DNWL--------ETENLPELYA------------IKLNHHSIHMESLAIRERI------------ 391
            ..||        .|...|.::.            :.|..|...:.:|.:...:            
plant   400 QEWLIWMALVAAGTTRAPRVHLRADIPGLTTDEDLILKIHKDRVNTLLVVATLVATMAFAAGLSV 464

  Fly   392 -LGRNNPELPQAI-------IYRGAVMADQGRFYQCQV-----LWNYAIDLR-MRNNVSVDRDLL 442
             ||.|:.|....:       .:...|:.:....|...:     :.....||: |.........||
plant   465 PLGYNSTEFKSNVKHSYEESAFHAFVICNSIAVYTAVISTVALIGTQLADLKCMLTTFKFIVPLL 529

  Fly   443 RFAQLFAQILRVENHNLTLDH----------------------VLP-------VLAKCQQEIENN 478
            .|:.:...:..|....|.|.|                      ::|       .|::....:..|
plant   530 GFSIIAMSLAFVAGLYLVLGHHYWLAIFVLASGGFYLMALLLLIIPYASPYTFTLSRSLNSLVQN 594

  Fly   479 KFK-------------------IKEAKPNACPSLWQDQNNQNCITALYLIKIVTHLARRKKDQNI 524
            ..|                   ||..:.|.|     .|.|         |.:.:.:..||...| 
plant   595 MSKEDVDSVNQLVPAPTEELALIKAIQVNRC-----IQGN---------IGVTSMMVPRKHTHN- 644

  Fly   525 DEEHIQQLFLVVRKFIQNDTRLQDGQTLLHIAVNGVMPVDEFYTNE----MCRFPCY 577
                .:...||.|:  ||::    |.|.|.||.....|...|..|.    :|.|.|:
plant   645 ----FRVPVLVARQ--QNNS----GLTALDIAELNPNPTTSFERNRLRVWLCVFSCF 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 28/115 (24%)
ANK repeat 103..129 CDD:293786 8/25 (32%)
Ank_2 105..206 CDD:289560 27/117 (23%)
ANK 142..262 CDD:238125 33/154 (21%)
ANK repeat 142..173 CDD:293786 11/30 (37%)
ANK repeat 178..206 CDD:293786 4/29 (14%)
Ank_2 180..266 CDD:289560 23/120 (19%)
ANK repeat 208..239 CDD:293786 11/63 (17%)
ANK repeat 241..266 CDD:293786 8/24 (33%)
Ank_4 244..294 CDD:290365 16/63 (25%)
ANK 548..685 CDD:238125 11/34 (32%)
ANK repeat 548..594 CDD:293786 11/34 (32%)
ANK repeat 596..636 CDD:293786
AT4G03490NP_001328102.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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