DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fem-1 and AT4G05040

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001031584.1 Gene:AT4G05040 / 825846 AraportID:AT4G05040 Length:572 Species:Arabidopsis thaliana


Alignment Length:592 Identity:121/592 - (20%)
Similarity:183/592 - (30%) Gaps:242/592 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DLDRECNVIYDGMVV--------YGATALWVAAGMGHLQIVKMLVQ--AGAAINHNTKAQSSPLR 181
            |.|:||..:..|:..        .|.:.|.:||..|||::||.::.  ....:..|.|.| .||.
plant    91 DGDKECLEMLKGVGTPMACLKSDRGDSVLHLAARWGHLELVKNIISECPCLVLELNFKDQ-LPLH 154

  Fly   182 AACYEGRLDIVEFLIDNGADVNATNLFNNNTLMIAAYKGHHLVVKTLLQNGSRANDQAL---CGA 243
            .|.:.|...|||.|      |.:...|::               :...::..|.|...|   .|.
plant   155 VAAHAGHSAIVEAL------VASVTFFSD---------------RLAEEDRERLNPYVLRDKYGN 198

  Fly   244 TALHYAAESGHLDVVVALL--DHGATLKKNELGITPALQAAERLHEDVLEAFIERPELMSLEEQI 306
            ||||.|.|..::::..:|:  :..|:..:|..||:....|.|                   ...:
plant   199 TALHLAIEGRYMEMAASLVNENQNASFLENNEGISSLYMAVE-------------------AGDV 244

  Fly   307 TAL-ELLGATYANDKIKYDVNKAYGYLLRAMQLRYSNPRGVIRKRVQPTVPAYDNWLETENLPEL 370
            |.: |:|.....||                ::.|.||               .|:.||...    
plant   245 TLVKEILKTAGNND----------------LEGRNSN---------------LDSKLEGRK---- 274

  Fly   371 YAIKLNHHSIHMESLAIRERILGRNNPELPQAIIYRGAVMADQGR----------FYQ--CQVLW 423
               .|.|.:::..|:.:.:.||.    |.|.....|.    ::||          ||:  |.:| 
plant   275 ---HLVHVALNARSIGVLDVILN----EYPSLEDERD----EEGRTCLSFAASIGFYKGVCNLL- 327

  Fly   424 NYAIDLRMRNNVSVDRDLLRFAQLFAQILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPN 488
                | |...||.|                                 |.   |:..|.|..|..|
plant   328 ----D-RSTKNVYV---------------------------------CD---EDGSFPIHTAAEN 351

  Fly   489 ACPSLWQDQNNQNCITALYLIKIVTHLARRKKDQNIDEEHIQQLFLVVRKFIQNDTRLQDGQTLL 553
            .                  .|:||..:.:|....               |.:.|..    ||.:|
plant   352 G------------------HIRIVKEILKRCPHS---------------KHMLNKL----GQNVL 379

  Fly   554 HIA--------VNGVMPVDEFYTNEMCRFPCYATALVLVHCGASVVAVDSDRNTPLHILVTKVNT 610
            |||        |..:|..|:                 ..|.|   |..|.|.|||||:.|.....
plant   380 HIAAKIGEHNLVKSLMRSDD-----------------TKHLG---VGQDVDGNTPLHLAVLNWRY 424

  Fly   611 TQDRQ-AEMARILELFVEAGAHLDAVNAAGQTAATACKLPILANRLHAHQ--------NAHTSLK 666
            ...|. |...:||:|          .|..|.||....:..:..|.:. |:        :||....
plant   425 RSIRTLASDVKILQL----------RNDNGLTARGIAESVLKPNYIF-HERLTLAFLLDAHAFRG 478

  Fly   667 CLAARSI 673
            |.:.:|:
plant   479 CGSVKSL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 24/78 (31%)
ANK repeat 103..129 CDD:293786 1/1 (100%)
Ank_2 105..206 CDD:289560 26/88 (30%)
ANK 142..262 CDD:238125 32/124 (26%)
ANK repeat 142..173 CDD:293786 9/32 (28%)
ANK repeat 178..206 CDD:293786 9/27 (33%)
Ank_2 180..266 CDD:289560 20/90 (22%)
ANK repeat 208..239 CDD:293786 3/30 (10%)
ANK repeat 241..266 CDD:293786 8/26 (31%)
Ank_4 244..294 CDD:290365 13/51 (25%)
ANK 548..685 CDD:238125 35/143 (24%)
ANK repeat 548..594 CDD:293786 12/53 (23%)
ANK repeat 596..636 CDD:293786 12/40 (30%)
AT4G05040NP_001031584.1 ANK 111..251 CDD:238125 41/180 (23%)
ANK repeat 114..146 CDD:293786 9/31 (29%)
Ank_2 119..222 CDD:289560 32/124 (26%)
ANK repeat 148..194 CDD:293786 15/67 (22%)
ANKYR 176..394 CDD:223738 66/376 (18%)
ANK 301..421 CDD:238125 44/222 (20%)
ANK repeat 306..338 CDD:293786 11/70 (16%)
ANK repeat 340..372 CDD:293786 9/64 (14%)
ANK repeat 374..408 CDD:293786 12/57 (21%)
Ank_2 379..>447 CDD:289560 25/97 (26%)
PGG 495..>571 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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