back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Fem-1 and ankrd46b

DIOPT Version :9

Sequence 1:	NP_611508.1	Gene:	Fem-1 / 37344	FlyBaseID:	FBgn0034542	Length:	702	Species:	Drosophila melanogaster
Sequence 2:	NP_991159.1	Gene:	ankrd46b / 402888	ZFINID:	ZDB-GENE-050114-7	Length:	228	Species:	Danio rerio

Alignment Length:	173	Identity:	49/173 - (28%)
Similarity:	75/173 - (43%)	Gaps:	27/173 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   172 NTKAQSS-PLRAACYEGRLDIVEFLIDNGADVNATNLFNNNTLMIAAYKGHHLVVKTLLQNGSRA 235
            |..:|:| ||..||.:|.|.....|::.|.|.|..:......|.:||.:|:..:.:.|.:.|:..
Zfish     7 NDSSQTSVPLLQACIDGDLSFARRLLETGCDPNIRDHRGRTGLHLAAARGNVDICRFLHKFGADL 71

  Fly   236 NDQALCGATALHYAAESGHLDVVVALLDHGATLK-KNELGITPALQAAER-LHEDVLEAFIERPE 298
            ......|.||||..   ||:|.:..|:.:|..:. .|..|.||.:.|..| :::|.:..
Zfish    72 LATDYQGNTALHLC---GHVDTIQFLVSNGLKIDICNHNGSTPLVLAKRRGVNKDAIRL------ 127

  Fly   299 LMSLEEQITALELLGATYANDKIKYDVNKAYGYLLRAMQLRYS 341
            |..||||    |:.|           .|:.....|.|||:..|
Zfish   128 LEGLEEQ----EVKG-----------FNRGAHSKLEAMQMAES 155

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.