DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fem-1 and FEM1B

DIOPT Version :9

Sequence 1:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_056137.1 Gene:FEM1B / 10116 HGNCID:3649 Length:627 Species:Homo sapiens


Alignment Length:643 Identity:259/643 - (40%)
Similarity:369/643 - (57%) Gaps:31/643 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LHLAARSGQMLSFVEILNSVSCRAVQTHLVNTNFDQPDGQSLTPLTMAAMMGNVKFVKTLLSHYD 125
            ::.||..|::|:...:|.:.|...::..|...:  |..||..|||.:||..|:.|.|:.||.||.
Human     8 VYKAASEGKVLTLAALLLNRSESDIRYLLGYVS--QQGGQRSTPLIIAARNGHAKVVRLLLEHYR 70

  Fly   126 VDLDRECNVIYDGMVVYGATALWVAAGMGHLQIVKMLVQAGAAINHNTKAQSSPLRAACYEGRLD 190
            |...:...|.:||.|:.||||||.|||.||.::||:||..||.:||.|...|:||||||::||||
Human    71 VQTQQTGTVRFDGYVIDGATALWCAAGAGHFEVVKLLVSHGANVNHTTVTNSTPLRAACFDGRLD 135

  Fly   191 IVEFLIDNGADVNATNLFNNNTLMIAAYKGHHLVVKTLLQNGSRANDQALCGATALHYAAESGHL 255
            ||::|::|.|:::..|.::|..|||||||||..||:.||:..:..|.:|.|||||||:|||:||:
Human   136 IVKYLVENNANISIANKYDNTCLMIAAYKGHTDVVRYLLEQRADPNAKAHCGATALHFAAEAGHI 200

  Fly   256 DVVVALLDHGATLKKNELGITPALQAAERLHEDVLEAFIERPELMSLEEQITALELLGATYANDK 320
            |:|..|:...|.:..|..|:||...|||....||:|..:...: .....:|.|||||||::|||:
Human   201 DIVKELIKWRAAIVVNGHGMTPLKVAAESCKADVVELLLSHAD-CDRRSRIEALELLGASFANDR 264

  Fly   321 IKYDVNKAYGYLLRAMQLRYSNPRGVIRKRVQPTVPAYDNWLETENLPELYAIKLNHHSIHMESL 385
            ..||:.|.|.||..||..|:.:...::.|.|.|.:.||.|..|..|..||.:|:.:..::|||.|
Human   265 ENYDIIKTYHYLYLAMLERFQDGDNILEKEVLPPIHAYGNRTECRNPQELESIRQDRDALHMEGL 329

  Fly   386 AIRERILGRNNPELPQAIIYRGAVMADQGRFYQCQVLWNYAIDLRMRNNVSVDRDLLRFAQLFAQ 450
            .:||||||.:|.::...|||||||.||...|.||..||.:|:.||.:.|.:..:|||||||:|:|
Human   330 IVRERILGADNIDVSHPIIYRGAVYADNMEFEQCIKLWLHALHLRQKGNRNTHKDLLRFAQVFSQ 394

  Fly   451 ILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKP----NACPSLWQDQNNQNCITALYLIKI 511
            ::.: |..:....:..||.....|||.:..::|....    ||     .|....|..|.|||:.|
Human   395 MIHL-NETVKAPDIECVLRCSVLEIEQSMNRVKNISDADVHNA-----MDNYECNLYTFLYLVCI 453

  Fly   512 VTHLARRKKDQNIDEEHIQQLFLVVRKFIQNDTRLQDGQTLLHIAVNGVMPVDEFYTNEMCRFPC 576
            .|.....::||....:.|..|       |..|.|.::|.||||:|||...|||:|:||::|.||.
Human   454 STKTQCSEEDQCKINKQIYNL-------IHLDPRTREGFTLLHLAVNSNTPVDDFHTNDVCSFPN 511

  Fly   577 YATALVLVHCGASVVAVDSDRNTPLHILVTKVNTTQDRQAEMARILELFVEAGAHLDAVNAAGQT 641
            .....:|:.|||.|.|||::.|:.|||:|.......|.....:.|:.| ||||||.|..|...:|
Human   512 ALVTKLLLDCGAEVNAVDNEGNSALHIIVQYNRPISDFLTLHSIIISL-VEAGAHTDMTNKQNKT 575

  Fly   642 ----AATACKLPILANRLHAHQNAHTSLKCLAARSIATNRLNFKGLIPTQLEAFIQMH 695
                :.|.....:|..::      ..||||||||::..|.:|::..||..||.|:..|
Human   576 PLDKSTTGVSEILLKTQM------KMSLKCLAARAVRANDINYQDQIPRTLEEFVGFH 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fem-1NP_611508.1 ANK 61..196 CDD:238125 60/134 (45%)
ANK repeat 103..129 CDD:293786 13/25 (52%)
Ank_2 105..206 CDD:289560 51/100 (51%)
ANK 142..262 CDD:238125 67/119 (56%)
ANK repeat 142..173 CDD:293786 19/30 (63%)
ANK repeat 178..206 CDD:293786 15/27 (56%)
Ank_2 180..266 CDD:289560 46/85 (54%)
ANK repeat 208..239 CDD:293786 15/30 (50%)
ANK repeat 241..266 CDD:293786 15/24 (63%)
Ank_4 244..294 CDD:290365 23/49 (47%)
ANK 548..685 CDD:238125 54/140 (39%)
ANK repeat 548..594 CDD:293786 23/45 (51%)
ANK repeat 596..636 CDD:293786 15/39 (38%)
FEM1BNP_056137.1 Ank_2 11..117 CDD:403870 45/107 (42%)
ANK 1 45..74 14/28 (50%)
ANK repeat 48..85 CDD:293786 16/36 (44%)
ANK repeat 87..118 CDD:293786 19/30 (63%)
ANK 2 87..116 17/28 (61%)
Ank_2 92..183 CDD:403870 48/90 (53%)
ANK repeat 120..151 CDD:293786 16/30 (53%)
ANK 3 120..149 16/28 (57%)
ANK repeat 153..183 CDD:293786 15/29 (52%)
ANK 4 153..182 14/28 (50%)
Ank_2 158..247 CDD:403870 41/89 (46%)
ANK 5 186..215 16/28 (57%)
ANK repeat 186..211 CDD:293786 15/24 (63%)
ANK 6 218..248 9/30 (30%)
ANK repeat 218..247 CDD:293786 9/29 (31%)
TPR 344..377 17/32 (53%)
PHA03095 475..>613 CDD:222980 57/144 (40%)
ANK repeat 483..529 CDD:293786 23/45 (51%)
ANK 7 483..527 22/43 (51%)
ANK repeat 531..570 CDD:293786 15/39 (38%)
ANK 8 531..568 14/37 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159012
Domainoid 1 1.000 146 1.000 Domainoid score I4568
eggNOG 1 0.900 - - E2759_KOG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7714
Inparanoid 1 1.050 426 1.000 Inparanoid score I1756
Isobase 1 0.950 - 0 Normalized mean entropy S3789
OMA 1 1.010 - - QHG49484
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 1 1.000 - - FOG0008196
OrthoInspector 1 1.000 - - oto91596
orthoMCL 1 0.900 - - OOG6_108967
Panther 1 1.100 - - LDO PTHR24173
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4569
SonicParanoid 1 1.000 - - X856
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.750

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