Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001119772.1 | Gene: | Islr / 686539 | RGDID: | 1596359 | Length: | 428 | Species: | Rattus norvegicus |
Alignment Length: | 386 | Identity: | 95/386 - (24%) |
---|---|---|---|
Similarity: | 150/386 - (38%) | Gaps: | 80/386 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 343 PGM-RNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGI 406
Fly 407 VAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESL 471
Fly 472 QMQENPLSCDCSIRPFAEWLQESQLHSSLS------ASCVTPPRLEGAPLLQVPVETLSCDMDNV 530
Fly 531 EKDNANIMQHLETLAKPNQTSPIKDLSEEIILHELHFSTDYGLI--LTWLLNLSKKDYMCDAIFV 593
Fly 594 YKEEHIN-----------EILIDNSPIHCESKVVNGQNTV------SVIVPDSSSLEIGESYRFC 641
Fly 642 LVMIQEQKPDSELNIGCSNITRLERSSPGAVPVSRQYQRRP------YYNANELKPEVVHD 696 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 44/136 (32%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | |||
LRR_8 | 322..382 | CDD:290566 | 12/39 (31%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 2/4 (50%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 418..478 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 17/55 (31%) | ||
Islr | NP_001119772.1 | leucine-rich repeat | 32..51 | CDD:275380 | 2/4 (50%) |
LRR_8 | 51..110 | CDD:404697 | 21/58 (36%) | ||
leucine-rich repeat | 52..75 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 99..158 | CDD:404697 | 22/58 (38%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 6/22 (27%) | ||
PCC | 153..>227 | CDD:188093 | 22/79 (28%) | ||
Ig | 239..343 | CDD:416386 | 26/129 (20%) | ||
Ig strand C | 265..287 | CDD:409353 | 4/41 (10%) | ||
Ig strand C' | 288..290 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 304..307 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 310..316 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 323..331 | CDD:409353 | 4/9 (44%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |