Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001243575.1 | Gene: | flrt3 / 558864 | ZFINID: | ZDB-GENE-030131-1988 | Length: | 649 | Species: | Danio rerio |
Alignment Length: | 590 | Identity: | 132/590 - (22%) |
---|---|---|---|
Similarity: | 222/590 - (37%) | Gaps: | 143/590 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 161 GMML-LADRLRTSPYSIS-------LLDCSLRNVTFL-----SDAKIFDNVSLHGLVISSGEIKR 212
Fly 213 VHKSAFLGIRGPLQALG------LPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLT 271
Fly 272 SLVYLELSNNQIS--SISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLN 334
Fly 335 GPLSEQTLPGMRNLESLNLNRNLI--KSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALD 397
Fly 398 SLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAM 462
Fly 463 DGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSA---SCVTPPRLEGAPLLQVPVETLS 524
Fly 525 CDMDNVEKDNANIMQHLETLAKPNQTSPIK----------------DL----------SEEIILH 563
Fly 564 ELHFSTDYGLILTWLLNLSKKDYMCDAIFVYKEEHINEILIDNSPI--HCESKVVNGQNTVSVIV 626
Fly 627 PDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNIT---------RLERSSPGAVPVSRQYQRRP 682
Fly 683 YYNAN 687 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 47/193 (24%) |
leucine-rich repeat | 179..199 | CDD:275378 | 5/24 (21%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 8/28 (29%) | ||
LRR_8 | 249..307 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <270..479 | CDD:238064 | 53/212 (25%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 20/61 (33%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 9/24 (38%) | ||
LRR_8 | 370..428 | CDD:290566 | 12/57 (21%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 418..478 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 476..526 | CDD:214507 | 12/52 (23%) | ||
flrt3 | NP_001243575.1 | LRRNT | 31..61 | CDD:214470 | 5/29 (17%) |
leucine-rich repeat | 61..84 | CDD:275378 | 7/36 (19%) | ||
leucine-rich repeat | 85..105 | CDD:275380 | 5/21 (24%) | ||
LRR_RI | 104..327 | CDD:238064 | 66/257 (26%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 130..155 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 131..211 | CDD:290566 | 23/85 (27%) | ||
leucine-rich repeat | 156..176 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 177..200 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 178..237 | CDD:290566 | 20/73 (27%) | ||
leucine-rich repeat | 201..226 | CDD:275380 | 9/24 (38%) | ||
leucine-rich repeat | 227..248 | CDD:275380 | 8/46 (17%) | ||
LRR_8 | 247..306 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 6/22 (27%) | ||
LRRCT | 305..356 | CDD:214507 | 13/59 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.960 |