Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001920877.1 | Gene: | si:ch211-237i5.4 / 557635 | ZFINID: | ZDB-GENE-131121-468 | Length: | 346 | Species: | Danio rerio |
Alignment Length: | 277 | Identity: | 88/277 - (31%) |
---|---|---|---|
Similarity: | 124/277 - (44%) | Gaps: | 43/277 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 252 LDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRL----GDYAQ 312
Fly 313 SLRSLSQCLSLRQLDLQANNLNGPLSEQTL--PGMRNLESLNLNRNLIKSIQNKALANFSRLVSL 375
Fly 376 SLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAP 440
Fly 441 LPSLRELRLAGNDISIVARNAMDGARELES-LQMQENPLSCDCSI-RPFAEWLQESQLH--SSLS 501
Fly 502 ASCVTPPRLEGAPLLQV 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 28/85 (33%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 19/54 (35%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 7/19 (37%) | ||
LRR_RI | <270..479 | CDD:238064 | 66/215 (31%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 7/28 (25%) | ||
LRR_8 | 322..382 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 10/25 (40%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 370..428 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 418..478 | CDD:290566 | 17/60 (28%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 5/22 (23%) | ||
LRRCT | 476..526 | CDD:214507 | 18/46 (39%) | ||
si:ch211-237i5.4 | XP_001920877.1 | leucine-rich repeat | 34..53 | CDD:275380 | |
leucine-rich repeat | 54..75 | CDD:275380 | 7/19 (37%) | ||
LRR_RI | <69..238 | CDD:238064 | 64/201 (32%) | ||
LRR_8 | 75..134 | CDD:290566 | 21/64 (33%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 7/28 (25%) | ||
LRR_8 | 122..182 | CDD:290566 | 28/92 (30%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 11/28 (39%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 170..230 | CDD:290566 | 22/59 (37%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 220..240 | CDD:275380 | 5/19 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |