Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001018372.2 | Gene: | lrit2 / 553557 | ZFINID: | ZDB-GENE-050522-160 | Length: | 561 | Species: | Danio rerio |
Alignment Length: | 421 | Identity: | 87/421 - (20%) |
---|---|---|---|
Similarity: | 147/421 - (34%) | Gaps: | 149/421 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 273 LVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPL 337
Fly 338 SEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLS 402
Fly 403 YNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLP-----SLRELRLAGNDISIVARNAM 462
Fly 463 DGARELESLQMQENPLSCDCSIRPFAEWLQESQ-----LHSSLSAS-----------------CV 505
Fly 506 TPPRLEGAPLLQVPVE-----TLSCDMD-------------NVEKDNANIMQHLETLAKPNQTSP 552
Fly 553 IKDLSEEIILHELHFSTDYGLILTWLLNLSKKDYMCDAIFVYKEEHINEILIDNSPIHCESKVVN 617
Fly 618 GQNTVSVIVPDSSSLEIGESYRFCLVMIQEQ 648 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 10/60 (17%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 8/33 (24%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 46/210 (22%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 4/24 (17%) | ||
LRR_8 | 322..382 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 418..478 | CDD:290566 | 14/64 (22%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 9/27 (33%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 3/22 (14%) | ||
LRRCT | 476..526 | CDD:214507 | 17/76 (22%) | ||
lrit2 | NP_001018372.2 | LRR 1 | 55..76 | 4/19 (21%) | |
LRR_8 | 56..114 | CDD:290566 | 17/84 (20%) | ||
leucine-rich repeat | 56..79 | CDD:275378 | 4/22 (18%) | ||
LRR_4 | 78..118 | CDD:289563 | 14/66 (21%) | ||
LRR 2 | 79..102 | 8/49 (16%) | |||
leucine-rich repeat | 80..103 | CDD:275378 | 8/49 (16%) | ||
LRR_8 | 103..162 | CDD:290566 | 25/82 (30%) | ||
LRR_4 | 103..143 | CDD:289563 | 15/39 (38%) | ||
LRR 3 | 103..124 | 7/20 (35%) | |||
leucine-rich repeat | 104..127 | CDD:275378 | 6/22 (27%) | ||
LRR_4 | 126..166 | CDD:289563 | 19/63 (30%) | ||
LRR 4 | 127..150 | 11/46 (24%) | |||
leucine-rich repeat | 128..151 | CDD:275378 | 12/46 (26%) | ||
LRR 5 | 151..172 | 8/20 (40%) | |||
leucine-rich repeat | 152..165 | CDD:275378 | 7/12 (58%) | ||
leucine-rich repeat | 189..201 | CDD:275378 | 4/27 (15%) | ||
TPKR_C2 | 197..240 | CDD:301599 | 10/42 (24%) | ||
IG_like | 258..341 | CDD:214653 | 19/115 (17%) | ||
IGc2 | 264..328 | CDD:197706 | 15/95 (16%) | ||
fn3 | 366..438 | CDD:278470 | 2/7 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 507..561 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |