Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093128.1 | Gene: | LRRN3 / 54674 | HGNCID: | 17200 | Length: | 708 | Species: | Homo sapiens |
Alignment Length: | 763 | Identity: | 168/763 - (22%) |
---|---|---|---|
Similarity: | 288/763 - (37%) | Gaps: | 200/763 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 116 VSSLPLPVDDALMEWKCPNITGTRNAELECGCDL------------PHTLRCNIDLHGMMLLADR 168
Fly 169 LRTSPYSISLLDCSLRNVTFLSDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALG--LP 231
Fly 232 GNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRK 296
Fly 297 LEVLKLGGN---RLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLI 358
Fly 359 KSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNG---IVAISSASLQHLSRL 420
Fly 421 TVLDLTHN-FLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSI 484
Fly 485 RPFAEWLQESQLHSSL----SASCVTPPRLEGAPLLQV----------PV---ETLSCDMDNVEK 532
Fly 533 DNANIMQHLETLAKPNQTSPIKDLSEEIILHELHFSTDYGLILTWLLNLSKKDYMCDAIFVYKEE 597
Fly 598 HINEILIDNSPIHCESKV-VNGQNTVSVIVPDSSSLE-------IGESYRFCLVMIQEQKPDSEL 654
Fly 655 NIGCSNITRLERSSPGAVPVS-------------------------RQYQRRP----YYNANELK 690
Fly 691 P----EVVHDAGEDYQVNQRRFNSVV--GSQPQQTQ-----QSTLL------------------- 725
Fly 726 ---------HSYTVIDSLNKSFLPGLGLGVLVTSVLVLIWGATRIRQT 764 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 52/187 (28%) |
leucine-rich repeat | 179..199 | CDD:275378 | 3/19 (16%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 225..248 | CDD:275380 | 9/24 (38%) | ||
LRR_8 | 249..307 | CDD:290566 | 18/60 (30%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <270..479 | CDD:238064 | 55/215 (26%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 7/27 (26%) | ||
LRR_8 | 322..382 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 370..428 | CDD:290566 | 14/60 (23%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/25 (24%) | ||
LRR_8 | 418..478 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 5/22 (23%) | ||
LRRCT | 476..526 | CDD:214507 | 18/66 (27%) | ||
LRRN3 | NP_001093128.1 | LRRNT | 28..72 | CDD:214470 | 13/57 (23%) |
LRR 1 | 70..91 | 2/20 (10%) | |||
leucine-rich repeat | 72..93 | CDD:275380 | 3/21 (14%) | ||
LRR | <75..355 | CDD:227223 | 75/291 (26%) | ||
LRR 2 | 93..114 | 5/23 (22%) | |||
leucine-rich repeat | 94..117 | CDD:275380 | 5/25 (20%) | ||
LRR 3 | 117..138 | 7/20 (35%) | |||
leucine-rich repeat | 118..141 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 141..162 | 4/20 (20%) | |||
leucine-rich repeat | 142..165 | CDD:275380 | 6/22 (27%) | ||
LRR 5 | 165..186 | 6/20 (30%) | |||
leucine-rich repeat | 166..189 | CDD:275380 | 7/22 (32%) | ||
LRR 6 | 189..210 | 7/25 (28%) | |||
leucine-rich repeat | 190..213 | CDD:275380 | 7/27 (26%) | ||
LRR 7 | 213..234 | 6/21 (29%) | |||
leucine-rich repeat | 214..237 | CDD:275380 | 7/23 (30%) | ||
LRR 8 | 237..258 | 7/20 (35%) | |||
leucine-rich repeat | 238..261 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 261..282 | 6/20 (30%) | |||
leucine-rich repeat | 262..285 | CDD:275380 | 6/24 (25%) | ||
LRR 10 | 285..304 | 4/18 (22%) | |||
leucine-rich repeat | 286..310 | CDD:275380 | 5/23 (22%) | ||
LRR 11 | 310..332 | 4/21 (19%) | |||
leucine-rich repeat | 311..333 | CDD:275380 | 4/21 (19%) | ||
LRR 12 | 335..358 | 5/22 (23%) | |||
leucine-rich repeat | 336..359 | CDD:275380 | 5/22 (23%) | ||
PCC | 341..>442 | CDD:188093 | 25/106 (24%) | ||
Ig | 437..513 | CDD:325142 | 15/118 (13%) | ||
fn3 | 526..593 | CDD:306538 | 12/67 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |