Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013541.1 | Gene: | islr2 / 541396 | ZFINID: | ZDB-GENE-050320-95 | Length: | 712 | Species: | Danio rerio |
Alignment Length: | 433 | Identity: | 97/433 - (22%) |
---|---|---|---|
Similarity: | 173/433 - (39%) | Gaps: | 117/433 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 342 LPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGI 406
Fly 407 VAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESL 471
Fly 472 QMQENPLSCDCSIRPFAEWLQESQLHSSLS------ASCVTPPRLEGAPLLQVPVETLSCD---- 526
Fly 527 ----MDNVEK----DNANIMQHLETLAKP-----------NQ--TSPIKDLSEEIILHELHFSTD 570
Fly 571 YGLILTWLLNLSKKDYMCDAIFVYKEEHINEILIDNSPIHCESKVV-NGQNTVSVIVPDSSSLEI 634
Fly 635 GESYRFCLVMIQEQKPDSELNIGCSNITR------LERSSPGAVPVSRQYQRRPYYNANELKPEV 693
Fly 694 VHDAGEDYQVNQRRFNSVVGSQPQQTQQSTLLHSYTVIDSLNK 736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 39/136 (29%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | |||
LRR_8 | 322..382 | CDD:290566 | 15/39 (38%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 2/4 (50%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 370..428 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 418..478 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 5/22 (23%) | ||
LRRCT | 476..526 | CDD:214507 | 17/55 (31%) | ||
islr2 | NP_001013541.1 | leucine-rich repeat | 35..53 | CDD:275380 | 1/1 (100%) |
LRR_RI | <47..>184 | CDD:238064 | 37/134 (28%) | ||
LRR_8 | 53..113 | CDD:290566 | 20/61 (33%) | ||
leucine-rich repeat | 57..78 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 79..102 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 102..161 | CDD:290566 | 17/58 (29%) | ||
leucine-rich repeat | 103..126 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 127..150 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 151..174 | CDD:275380 | 5/22 (23%) | ||
LRRCT | 183..>221 | CDD:214507 | 14/41 (34%) | ||
IG_like | 252..345 | CDD:214653 | 25/138 (18%) | ||
Ig | 256..345 | CDD:299845 | 25/134 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24366 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |