Sequence 1: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_958813.1 | Gene: | Flrt1 / 396184 | MGIID: | 3026647 | Length: | 674 | Species: | Mus musculus |
Alignment Length: | 611 | Identity: | 134/611 - (21%) |
---|---|---|---|
Similarity: | 227/611 - (37%) | Gaps: | 159/611 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 269 GLTSL--------VYLELSNNQISS--ISQ--RTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCL 321
Fly 322 SLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIK--SIQNKALANFS--RLVSLSLRH--- 379
Fly 380 ----------------NQIDVLQDHAFFGLGALDSLDLSYNGIV--AISSASLQHLSRLTVLDLT 426
Fly 427 HNFLRA--------------LTSDLIAPLP-----SLRELR---LAGNDISIVARNAMDGARELE 469
Fly 470 SLQMQENPLSCDCSIRPFAEWLQ-ESQLHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKD 533
Fly 534 NAN------IMQHLETLAKPNQTSPIK--------------------DLSEEIILHELHFSTDYG 572
Fly 573 LILTWLLNLSKKDYMCDAIFVYKEEH------INEILID--------------NSPIHCESKVVN 617
Fly 618 GQNTVSVIVPDSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITRLERSSPGAVPV-------- 674
Fly 675 -SRQYQRRPYYNANE-LKPEVVHDAG----EDY-QVNQRRFNSVV-----GSQ-----PQQTQQS 722
Fly 723 TLLHSYTVIDSLNKSFLPG---LGLG 745 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | 28/76 (37%) |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | 18/49 (37%) | ||
leucine-rich repeat | 249..272 | CDD:275380 | 2/2 (100%) | ||
LRR_RI | <270..479 | CDD:238064 | 75/267 (28%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | 10/34 (29%) | ||
leucine-rich repeat | 297..322 | CDD:275380 | 5/24 (21%) | ||
LRR_8 | 322..382 | CDD:290566 | 23/82 (28%) | ||
leucine-rich repeat | 323..347 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 9/26 (35%) | ||
LRR_8 | 370..428 | CDD:290566 | 21/80 (26%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 11/41 (27%) | ||
leucine-rich repeat | 396..419 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 418..478 | CDD:290566 | 20/81 (25%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 10/41 (24%) | ||
leucine-rich repeat | 444..467 | CDD:275380 | 7/25 (28%) | ||
LRRCT | 476..526 | CDD:214507 | 9/50 (18%) | ||
Flrt1 | NP_958813.1 | PRK15370 | <58..>329 | CDD:185268 | 74/266 (28%) |
leucine-rich repeat | 108..128 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 129..152 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 153..178 | CDD:275380 | 9/24 (38%) | ||
leucine-rich repeat | 179..199 | CDD:275380 | 4/19 (21%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 224..249 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 250..271 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 272..295 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 296..319 | CDD:275380 | 5/22 (23%) | ||
PCC | 300..>406 | CDD:188093 | 19/105 (18%) | ||
FN3 | 441..505 | CDD:214495 | 8/67 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
1 | 0.960 |